LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma07g00205	ATGGGTAAAAAGGTAAGGGCATTGGCATTGACCTCGGCACCAcctaccgctgctgccattgcctatggattagacaagaaggcttccaggagtggcgaaaagaatgtggttatcttcgacctcggtggtggaacttttgatgtctccctcctcaccatccaggaagctattttccaagtgaaggccactgctggggacactcatttgggaggtcaagattttgataacagGCTTGTGAACCACTTCGTGTCTGAGTTCAAGAGGAAACACAAGAAGGATGTCAGCACTAATGCCAGAGCACTTAGGAGATTGAGGACTGCATGCGAGAGAGGGCTAAGAGGACTCTCTCTTCCACCACTCAAACTACCATCGAGATTGACTCTCTCTACGAAGGATTTCTTCAATGGCAAAGAGCTTTGCAAGAGCATTAACCCGGATGAGGCTGTAGCCTATGGGGCTGCTGTGCAGGCTGCGATTTTGAGCGGTGAAGGGAACGAGAAGGTTCAGGACTTGCTTCTGCTTGATGTCACTCCTCTTAGCCTCGGCATTGAGACTGCAGGAGGTGTGATGACAGTGTTGATTCCAAGGAACACAACCATTCCCACCAAGAAGGAACAGATTTTCTCAACTTATGCTGATAATCAGCCAGGAGTGCTAATTCAGGTGTATGAAGGCGAGAGGGCAAGCACCAAAGACAACAATCTTTTAGGGAAGTTTGAACTCACAGGCATCCCTTCAGCACCAAGAGGAGTTCCACAGATCAATGTGTGCTTTGACATTGACGCCAATGGTATTTTGAGGATAAGACCACAAGATCACGATCACTAA	828	0.3684	MGKKVRALALTSAPPTAAAIAYGLDKKASRSGEKNVVIFDLGGGTFDVSLLTIQEAIFQVKATAGDTHLGGQDFDNRLVNHFVSEFKRKHKKDVSTNARALRRLRTACERGLRGLSLPPLKLPSRLTLSTKDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGIETAGGVMTVLIPRNTTIPTKKEQIFSTYADNQPGVLIQVYEGERASTKDNNLLGKFELTGIPSAPRGVPQINVCFDIDANGILRIRPQDHDH	275

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma07g00205	275	SUPERFAMILY	Heat shock protein 70kD (HSP70), peptide-binding domain	166	269	IPR029047	-
	Gma07g00205	275	ProSitePatterns	Heat shock hsp70 proteins family signature 2.	38	51	IPR018181	-
	Gma07g00205	275	PANTHER	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED	130	272	-	-
	Gma07g00205	275	Gene3D	-	27	69	-	-
	Gma07g00205	275	PANTHER	HEAT SHOCK PROTEIN 70KDA	130	272	IPR013126	GO:0005524\|GO:0140662
	Gma07g00205	275	Gene3D	Substrate Binding Domain Of DNAk; Chain A, domain 1	158	274	IPR029047	-
	Gma07g00205	275	PANTHER	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED	14	116	-	-
	Gma07g00205	275	Gene3D	-	131	143	-	-
	Gma07g00205	275	Gene3D	Actin; Chain A, domain 4	70	116	-	-
	Gma07g00205	275	Pfam	Hsp70 protein	130	273	IPR013126	GO:0005524\|GO:0140662
	Gma07g00205	275	Pfam	Hsp70 protein	15	116	IPR013126	GO:0005524\|GO:0140662
	Gma07g00205	275	Gene3D	-	15	26	-	-
	Gma07g00205	275	SUPERFAMILY	Actin-like ATPase domain	32	162	IPR043129	-
	Gma07g00205	275	Gene3D	-	144	157	-	-
	Gma07g00205	275	PANTHER	HEAT SHOCK PROTEIN 70KDA	14	116	IPR013126	GO:0005524\|GO:0140662

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma07g00205	Gma-Chr7	1698732	1700571	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma07g00205	15	272	Calmodulin-binding Proteins	AT3G12580	61.875	5.19e-124	366

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma07g00205	K03283		-	pcad:102982689	356.681