Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00199 ATGGCGAAGAAATCACAGAAAAGCCTCAACAGCACTGGGAAGCGCACACGCAAAAGCGTCCCAAGAGACTCACCTCCACAACGAAGTTCAATCTATAGGGGTGTCACAAGGCATCGATGGACTGGTCGATATGAGGCTCATTTGTGGGATAAGAATTGCTGGAATGAATCACAGAGCAAGAAAGGAAGACAAGTATATCTAGGGGCATATGATGATGAAGAAGCCGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGATACCATTCTCAATTTTCCATTATCAAATTATGAGGAAAAGCTCAAGGAGATGGAGGGCCAGTCAAAAGAAGAATATATTGGATCCTTGAGAAGAAAAAGCAGTGGATTCTCTCGAGGAGTTTCAAAATACAGAGGCGTAGCAAGACACCACCATAACGGAAGATGGGAAGCTCGAATTGGAAGGGTCTTTGGCAACAAATATCTATACCTTGGAACTTACGCTACACAAGAAGAAGCAGCCGCAGCATATGACATGGCAGCAATAGAATACAGAGGACTTAACGCGGTTACAAACTTTGACCTGAGCCGTTATATCAATTGGCCACGTCCTAAAACAGAAGAAAATCATCAAACTATTCCTAGCAATGAAAATGTAAACTCTAATGCTGAACTTGAGCTAGGTTCGGCTAGTGATGAGATCACAGAAGAGGGTGTAGCACCATCTTCAGAATCAAATCCTTCTCGTCGCACATTCCCTGAAGACATTCAAACAATTTTTGAAAATCAAGATTCAGGCATCTACACTGAAAATGATGATATCATTTTTGGTGACCTGGGCTCCTTTGGTGCACCAATTTTTCATTACGAGCTTGATGTTTAG 873 0.4296 MAKKSQKSLNSTGKRTRKSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQVYLGAYDDEEAAARAYDLAALKYWGQDTILNFPLSNYEEKLKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAAAYDMAAIEYRGLNAVTNFDLSRYINWPRPKTEENHQTIPSNENVNSNAELELGSASDEITEEGVAPSSESNPSRRTFPEDIQTIFENQDSGIYTENDDIIFGDLGSFGAPIFHYELDV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00199 290 MobiDBLite consensus disorder prediction 1 15 - -
Gma07g00199 290 Gene3D AP2/ERF domain 31 99 IPR036955 GO:0003700|GO:0006355
Gma07g00199 290 Gene3D AP2/ERF domain 132 193 IPR036955 GO:0003700|GO:0006355
Gma07g00199 290 ProSiteProfiles AP2/ERF domain profile. 133 191 IPR001471 GO:0003700|GO:0006355
Gma07g00199 290 SUPERFAMILY DNA-binding domain 132 193 IPR016177 GO:0003677
Gma07g00199 290 ProSiteProfiles AP2/ERF domain profile. 31 97 IPR001471 GO:0003700|GO:0006355
Gma07g00199 290 Pfam AP2 domain 132 183 IPR001471 GO:0003700|GO:0006355
Gma07g00199 290 Pfam AP2 domain 31 89 IPR001471 GO:0003700|GO:0006355
Gma07g00199 290 MobiDBLite consensus disorder prediction 1 31 - -
Gma07g00199 290 SUPERFAMILY DNA-binding domain 30 99 IPR016177 GO:0003677
Gma07g00199 290 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 222 - -
Gma07g00199 290 SMART rav1_2 31 103 IPR001471 GO:0003700|GO:0006355
Gma07g00199 290 SMART rav1_2 133 197 IPR001471 GO:0003700|GO:0006355
Gma07g00199 290 CDD AP2 132 193 IPR001471 GO:0003700|GO:0006355
Gma07g00199 290 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 6 222 - -
Gma07g00199 290 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Gma07g00199 290 PRINTS Ethylene responsive element binding protein signature 173 193 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00199 Gma-Chr7 1662242 1666585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00199 27 195 AP2-EREBP Transcription Factor Family AT5G57390 74.556 4.48e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gma07g00199 AP2 3.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00199 K09285 - gmx:100807781 577.015