Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00189 ATGCCTGGTGTTTTAGCCAGGAGTTTTCAACTGCAGAATGATCAGAGTAATCTGAAGCAGGGAGACACCAAATTATCTGAAATGTTCTTAAAGGACAGGATAAACTCGATTGATTTCTTATCCAGCAGTAAATGTTTATCGTTGGTCTGTTGCATAAATCTGAGGCAGGGGAAATATCAGAAgggccgaagagcaattttaatggGTAATCACAAACCCAATGGAGACGGGCTTATGATTTATGACCCAAGAGTGGTCTCATCTTCATCGACGGTCAGAATAAATCTTGGAAGCAAAAGACGAATCAGAACCGTCGAGTGTGAGAAGCCCCAGGGCACAGAGCAACTACAAAACCCTACTTATCTCACTTTACAATGTTGTCAAGCCTGCCGAGAAAACCCTAGTTCGCTTGCAGTCACACAAGAGGCCAATCCTATTCATAGCTCGAGATGGAAGCAAGAACTCGATGCTGCCAAGAAGAAGAGAGCCGAGAGCCGCAAACTCATCTACAACAGAGCTAAGCAGTACGCTAAGGAGTACGATCACCAGGAGAAGGAATTGATTCGGTTGAAACGCGAGGCCAAGCTGAAAGGTGGTTTCTATGTGGATCCAGAGGCTAAGCTGTTGTTTATTATTCGCATTCGTGGTATTAATGCCATGGACCCCAAATCAAGGAAGATCCTGCAGTTGTTGCGATTGAGACAGATTTTCAATGGTGTATTTCTCAAAGTTAACAAAGCCACAGTGAACATGCTGCACAGAGTTGAGCCGTATGTGACTTATGGATACCCAAATCTCAAGAGTGTGAGAGAACTTATTTACAAGAGAGGGTATGGAAAGCTAATGAAGCAGAGGACTGCTCTAACTGACAACTCTATCATTGAGCAGGCTCTGGGCAAGTATGGAATCATATCCACTGAAGATCTGATCCATGAGATCATCACTGTTGGACCTCACTTTAAGGAGGCTAACAACTTCCTTTGGCCATTTAAGCTCAAGGCTCCTTTGGGTGGCTTAAAGAAGAAGAGAAACCATTATGTTGAGGGAGGTGATGCTGGAAACCGGGAGAATTACATCAATGAGCTAATCAGGAGAATGAATTGA 1104 0.4284 MPGVLARSFQLQNDQSNLKQGDTKLSEMFLKDRINSIDFLSSSKCLSLVCCINLRQGKYQKGRRAILMGNHKPNGDGLMIYDPRVVSSSSTVRINLGSKRRIRTVECEKPQGTEQLQNPTYLTLQCCQACRENPSSLAVTQEANPIHSSRWKQELDAAKKKRAESRKLIYNRAKQYAKEYDHQEKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQIFNGVFLKVNKATVNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLMKQRTALTDNSIIEQALGKYGIISTEDLIHEIITVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNRENYINELIRRMN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00189 367 Pfam Ribosomal L30 N-terminal domain 146 204 IPR012988 -
Gma07g00189 367 Gene3D - 312 367 IPR036919 -
Gma07g00189 367 Gene3D - 208 311 IPR036919 -
Gma07g00189 367 CDD Ribosomal_L7_archeal_euk 208 367 IPR035808 -
Gma07g00189 367 ProSitePatterns Ribosomal protein L30 signature. 227 259 IPR018038 -
Gma07g00189 367 SUPERFAMILY Ribosomal protein L30p/L7e 208 367 IPR036919 -
Gma07g00189 367 PANTHER 60S RIBOSOMAL PROTEIN L7-RELATED 123 367 - -
Gma07g00189 367 PANTHER 60S RIBOSOMAL PROTEIN L7 123 367 IPR039699 -
Gma07g00189 367 Coils Coil 173 193 - -
Gma07g00189 367 Pfam Ribosomal protein L30p/L7e 209 259 IPR016082 -
Gma07g00189 367 TIGRFAM uL30_euk: 60S ribosomal protein uL30 150 367 IPR005998 GO:0000463|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00189 Gma-Chr7 1590282 1596259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00189 152 367 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 85.648 1.98e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00189 K02937 - gmx:100305682 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00189 07 1590282 1596259 Gma07g00189 07 1590282 1596259 ECH