Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00183 ATGGAGGTGGTCAAAGCAATTGCCAAGCACGAACCTGCAGCTCCTGAAAGTGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAAGCAACTCATCACATCGGCACAGAAGATATCTAATCTCTTGTGTGGCAGTGATGCACAGACAGGAAATCTCGGTGGAGCTCGAATAGGAATTGTAGCCAAACCTTCTGCTGAATTTGTTGCTGGAATACTTGGGATTTGGCTTAGTGGAGGTGTTGCTGTTCCGCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGATTAATAATTCGGATGTATCTGCAATACTGAGTACTGAGGATCATACTGAAATAATGCAAAGCGTAGCCAATAAAAGCTCTTCTCAGTTTTTTCATCTTCCACCTGTTCTCAACAAGTCTTCTGAGAAAAGCAGAGATAAACATTCACAGAATGGGGGAATTCATACAGATAAAATTTTGTTGGATAAGTTTGGAAGATCAAGTGAAGATCCAGCACTGATTTTGTACACTAGTGGGACAACGGGTAAACCTAAGGGAGTTGTTCATACACACAGAAGCATCATTTCCCAGGTACAAACTTTGACAAAAGCTTGGGAGTACTCATCTGCTGACCAGTTTCTGCATTGTCTACCACTACATCATGTTCATGGGCTTTTCAATGGTTTAATGGCCCCTCTCTATGCAGGTTCCACGGTTGAGTTTTTGCCAAAATTTAGTGTGAGAGGAGTTTGGCAGAGATGGCGTGAGTCATATCCAACCGATGGTTCTAAGGCTGAAGAGGCTATAACTGTGTTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAAGCTGCTTCAGTATCTGCTGCAAAGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCACTGCCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTGTCGAATCCATTGAAAGGTGAGCGCAAGCCTGGAACCGTTGGCAAACCATTTCCTGGTATACAGGTCAAGATTATTGCAGATGAAGAGAGTGTGAATGGAAATACTGGAATGGGTGAGCTTTGCATTAAAAGCCCTTCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACGAAGGAATCATTTACTGATGATGGATTCTTTAAGACTGGAGATGCAGTTACTACAGATGAAGATGGATATTTCATCATTCTAGGACGTACTAATGCTGATATAATCAAGGCTGGTGGATATAAGCTGTCTGCATTAGAAATTGAATCGGTTATAATAGAGCATCCAGCTGTCTCAGAATGTTGCGTTTTAGGCCTACCAGACAAAGACTATGGAGAGATTGTTAGTGCAATCGTTGTGCCAGAGGCCGATGTTAAACGAAAACAAGATCAAGAATCAAAGCCTGTTCTAAGCCTAGAAGAATTATCCAACTGGGCCAAAGACAAAATTGCACCTTACAAGATTCCAACTCAGCTAATCGTGTGGGATAAACTCCCTCGCAATGCCATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAGCTGCTTGTTTCAGAACAGTGA 1632 0.4228 MEVVKAIAKHEPAAPESVAIRADQKSYSYKQLITSAQKISNLLCGSDAQTGNLGGARIGIVAKPSAEFVAGILGIWLSGGVAVPLATSYPEVELLYVINNSDVSAILSTEDHTEIMQSVANKSSSQFFHLPPVLNKSSEKSRDKHSQNGGIHTDKILLDKFGRSSEDPALILYTSGTTGKPKGVVHTHRSIISQVQTLTKAWEYSSADQFLHCLPLHHVHGLFNGLMAPLYAGSTVEFLPKFSVRGVWQRWRESYPTDGSKAEEAITVFTGVPTIYARLIQGYHAMDPELQAASVSAAKNLRLMMCGSSALPLPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIIADEESVNGNTGMGELCIKSPSLFKEYWKLPEVTKESFTDDGFFKTGDAVTTDEDGYFIILGRTNADIIKAGGYKLSALEIESVIIEHPAVSECCVLGLPDKDYGEIVSAIVVPEADVKRKQDQESKPVLSLEELSNWAKDKIAPYKIPTQLIVWDKLPRNAMGKVNKKELKKLLVSEQ 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00183 543 Gene3D - 5 427 IPR042099 -
Gma07g00183 543 Pfam AMP-binding enzyme C-terminal domain 444 529 IPR025110 -
Gma07g00183 543 CDD MCS 16 537 - -
Gma07g00183 543 PANTHER ACYL-COA SYNTHETASE 1 540 - -
Gma07g00183 543 Gene3D - 430 542 IPR045851 -
Gma07g00183 543 PRINTS AMP-binding signature 166 177 IPR020459 -
Gma07g00183 543 PRINTS AMP-binding signature 178 186 IPR020459 -
Gma07g00183 543 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
Gma07g00183 543 Pfam AMP-binding enzyme 14 433 IPR000873 -
Gma07g00183 543 PANTHER MALONATE--COA LIGASE-LIKE 1 540 - -
Gma07g00183 543 SUPERFAMILY Acetyl-CoA synthetase-like 7 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00183 Gma-Chr7 1536374 1544408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00183 166 541 Monolignol Biosynthesis Gene Families AT4G19010 29.124 5.03e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00183 K18660 - gmx:100813324 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00183 07 1536374 1544408 Gma07g00183 07 1536374 1544408 ECH
Gma07g00183 07 1536374 1544408 Gma08g01874 08 16853053 16862436 GST