Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00177 ATGACTCTCCCTTCACACGATGCTTGGATTCACACTTCCCACACCCTCCTCCCCAGATGGAAATCTCTTTCCCTCCTCTCTCATCAGCAGTCAACTCTTCCAATTTCTATATCAAGAGTTAACCAAGTTGATGCAGCAAGATTGGACGTTGAAATGTCAGCCATGTTGAAAGAGCAGTTGGTTAAAGTGTTCTTATTAATGAAGCCAGGAATGTTATTTCAGTATGAAGCCGAGCTTGATGCTTTCCTTGAGTTTCTTATTTGGCGGTTCTCAATTTGGGTGGACAAGCCAACCCCAGGCATTGCTCTCATGAACCTGAGGTACAGAGATGAACGTGCAGTAGAACCAAGAGATAAAGTCAGAACTGGTCTGGAGGGACCTGGACTCACTGTTGCTCAGAAGCTTTGGTATTGTGTTGCCACTGTTGGTGGCCAGTATATATGGGCTCGCTTACAATCCTTCTCTGCTTTTCGTAGATGGGGTGATACTGAGCAGAGACCGTTGGCTCGACGTTTATGGATCTTGATACAGCGGATAGAAGGAATATATAGAGCTGCTTCGTTTGGAAACCTGTTGATATTTCTTTGCACGGGAAGCAGATATCGAAATCTTATTGAAAGAGCATTACGAGCTAGGCTTGTATATGGAAGCCCAAATATGAATCGTGCTGTTAGCTTTGAATATATGAACCGGCAATTAGTTTGGAATGAATTTTCGGAAATGTTATTGTTGCTTCTCCCCCTACTTAATTCATCATCTGTGAAAAATCTTCTTCGACCTTTCTCTAAAGATAAATCATCGGGTTCAGCCGAGGATGGCACAGCATGTCCCATTTGCCAGGCTACTCCAACAATTCCTTATGTTGCTCTACCTTGTCAGCACAGATATTGTTACTACTGTCTTAGGACACGATGTGCTGCTGCTCCATCATTTAGGTGTTCCAGGTGCAGTGAGCCTGTTGTTGCTATGCAACGGCTTGGTGCTAGTAAGAAAGCAAAACACAACACTCAAAGCTTTAGCCAAAGGCTTGTTTGGTTGCACATACAAGGAAATATCACAAAGCAAATGATGGCTGGGAACCCTAACTGGTGGACTATGCATCCACCATCTCTGATCCCTCCACAGTATGTTCTTGGATCTTCTTCAATTCCTTTTAATTCTTCTACACAAAACCAAGAGCCCCCTCACTCATTGAGCCAACTTCTTTTCACTGGTTTACCAGGAGAAGAAGAGAGAGTTGCATTCAGTCATTTCCAATCAAAAAAGTTAGATGAATGGAATGAACAAATGCTTAACCCATCCTCTATCGTTCCTATGGCTGATGTAATAAAGCAAGAGGTTTCCCAAAGTGGCAACTTGTATCACCATGGACATGATCAGGAATTTCAGGTTTCTGGGGCACCTTGGTCACATATGGTACCAGTTTCTTCTTCCCCTAGGTCTAGTGTTGCTAGCTTCAGTAGCAATAATTTATTGGATTTCACTTACAACAAGACAGACCATAGGAAGAACCAACTACCAGATcacacatccgagTGTAATAGCACAGCCACTGGTGGAGTTTACAAGAAGACTAAGAGTCAACCATCTTCAAGCCAACCACCTCTCAAGGTGAGAAAGGAGAAGTTAGGTGATAGAATAACAGCTCTTCACCAGCTAGTTTCCCCGTTCGGAAAGactgacacagcttctgtcttgttagaagccattggatacataagattccttcagggtcaaattgagGCACTCAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCCACAGTCTCAACAGGTACACGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGACGCAAAAGATAAGCCAAGGGACTTGAAGAGTAGAGGGCTGTGCTTGGTTCCTGTGTCATGTACCCAACATGTTGGAAATGAAAATGGAGCTGATTACTGGGCACCAGCATATGGAAGTGGATTTTAA 2025 0.4193 MTLPSHDAWIHTSHTLLPRWKSLSLLSHQQSTLPISISRVNQVDAARLDVEMSAMLKEQLVKVFLLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAVEPRDKVRTGLEGPGLTVAQKLWYCVATVGGQYIWARLQSFSAFRRWGDTEQRPLARRLWILIQRIEGIYRAASFGNLLIFLCTGSRYRNLIERALRARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSVKNLLRPFSKDKSSGSAEDGTACPICQATPTIPYVALPCQHRYCYYCLRTRCAAAPSFRCSRCSEPVVAMQRLGASKKAKHNTQSFSQRLVWLHIQGNITKQMMAGNPNWWTMHPPSLIPPQYVLGSSSIPFNSSTQNQEPPHSLSQLLFTGLPGEEERVAFSHFQSKKLDEWNEQMLNPSSIVPMADVIKQEVSQSGNLYHHGHDQEFQVSGAPWSHMVPVSSSPRSSVASFSSNNLLDFTYNKTDHRKNQLPDHTSECNSTATGGVYKKTKSQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNPQSQQVHGERNSVFPEDPGQLLNDNGLKRKGAPNQDAKDKPRDLKSRGLCLVPVSCTQHVGNENGADYWAPAYGSGF 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00177 674 MobiDBLite consensus disorder prediction 591 607 - -
Gma07g00177 674 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 537 588 IPR036638 GO:0046983
Gma07g00177 674 MobiDBLite consensus disorder prediction 591 641 - -
Gma07g00177 674 SMART ring_2 276 316 IPR001841 -
Gma07g00177 674 CDD RING-HC_PEX2 275 317 - -
Gma07g00177 674 ProSitePatterns Zinc finger RING-type signature. 292 301 IPR017907 -
Gma07g00177 674 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 527 576 IPR011598 GO:0046983
Gma07g00177 674 MobiDBLite consensus disorder prediction 509 535 - -
Gma07g00177 674 SUPERFAMILY RING/U-box 270 322 - -
Gma07g00177 674 PANTHER - 3 333 - -
Gma07g00177 674 ProSiteProfiles Zinc finger RING-type profile. 276 317 IPR001841 -
Gma07g00177 674 MobiDBLite consensus disorder prediction 502 537 - -
Gma07g00177 674 Gene3D - 537 594 IPR036638 GO:0046983
Gma07g00177 674 Pfam Pex2 / Pex12 amino terminal region 49 254 IPR006845 -
Gma07g00177 674 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 359 IPR013083 -
Gma07g00177 674 CDD bHLH_AtbHLH_like 537 584 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00177 Gma-Chr7 1485455 1498065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00177 408 618 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.443 4.04e-39 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00177 K06664 - gmx:100800681 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00177 07 1485455 1498065 Gma07g00177 07 1485455 1498065 ECH
Gma07g00177 07 1485455 1498065 Gma08g01866 08 16786059 16790296 GST