Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00174 ATGACTACACCCTTGGAACATGATTACATAGGTTTATCAGAGGCTCCATCCATGGAAAAAAGCTGTGACAAGATATCCTCTTCGGTTTCCTCCAACCTTTCTTCTGAGGATGAGAACACTTCATCTCTGAACTTCAAGGAGACAGAGCTGAGGCTTGGCTTGCCCGGTTCTGAGTCTCCTGAGAACAACAAATTAGGGATCTCTCTCTTTGGCAAGGATTTGCAGAATAATGGCTATTCTTCTGCTTCTTCAACCCCTTCCAACAAGAACCTCAAGAGGGGCTTCTCTGATGCCATTAGCTCTTCTTCTTCCTCTTCTCGGAAATGGATTTTCTCCCAGAGTGATGCGGCAGCAACTGAGGCTGATTTGGAAAATGGTTCTAATAATACCTCTGCACGATGCAACAGAGAGGTTGATATGGTTCCTCACTACGAGAAACCAGCTCAGGTTGCTGCAACAAATGACCATGCTACTGTTCCTGCTCCAAAAGCACAAGTTGTGGGATGGCCACCAATTCGATCTTTTCGAAAGAACACGATGGCCTATAATTTGGCAAAATGCAACAACGAAACTGAGGAGAAACCAGGAGTAGCTTGTCTTTATGTTAAGGTCAGCATGGATGGTGCTCCGTATCTCAGAAAGGTTGATCTGAAAACCTACAGCAACTATATTGAACTTTCTTCAGGTCTTGAGAAAATGTTCAGCTGCTTCACCATTGGTCAATGCAATTCTCGTGCACTTCCTGGGAAAGATGGATTAAGTGAGAGTGCATTCAGGGATATTGTTGATGGCTCTGAATATGTTCTTACATATGTAGATAAAGAAGGAGACTGGATGCTTGTGGGTGATGTCCCTTGGGAGATGTTCACTGAGTCATGCAACAAACTAAGGATAATGAAAGGGTCCGAGGCAATCGGGCTAGCTCCAAGGGGTATGGAAAAATGTAGGAGCCAATACTAG 960 0.4437 MTTPLEHDYIGLSEAPSMEKSCDKISSSVSSNLSSEDENTSSLNFKETELRLGLPGSESPENNKLGISLFGKDLQNNGYSSASSTPSNKNLKRGFSDAISSSSSSSRKWIFSQSDAAATEADLENGSNNTSARCNREVDMVPHYEKPAQVAATNDHATVPAPKAQVVGWPPIRSFRKNTMAYNLAKCNNETEEKPGVACLYVKVSMDGAPYLRKVDLKTYSNYIELSSGLEKMFSCFTIGQCNSRALPGKDGLSESAFRDIVDGSEYVLTYVDKEGDWMLVGDVPWEMFTESCNKLRIMKGSEAIGLAPRGMEKCRSQY 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00174 319 Gene3D - 194 312 - -
Gma07g00174 319 SUPERFAMILY CAD & PB1 domains 200 300 - -
Gma07g00174 319 ProSiteProfiles PB1 domain profile. 199 301 IPR000270 GO:0005515
Gma07g00174 319 MobiDBLite consensus disorder prediction 21 46 - -
Gma07g00174 319 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 310 IPR003311 GO:0005634|GO:0006355
Gma07g00174 319 Pfam AUX/IAA family 47 310 IPR033389 -
Gma07g00174 319 PANTHER AUXIN-RESPONSIVE PROTEIN 4 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00174 Gma-Chr7 1466167 1468886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00174 201 317 B3 DNA Binding Superfamily AT1G30330 31.624 2.76e-09 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma07g00174 AUX_IAA 5.3e-86 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00174 07 1466167 1468886 Gma07g00174 07 1466167 1468886 ECH
Gma07g00174 07 1466167 1468886 Gma08g01863 08 16767505 16770532 GST