Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00159 ATGGAAGTGCCGGAATACTTCGTCGGAAGCTTTTTTGGCACCGGAGGAGCCGAACAGTTCTGCCCTCCGGAGAAGCGCCACTCCGACCAGAAAACCGGCGAGCCTTTCGCCATTGACGACCTCCTCGACTTCTCCCACGCCGACGCCATTATGTCCGACGGTTTCTTCGACAATGTCGCCGGAAACTCCACCGACTCCTCCACCGTCACCGCCGTCGACAGCTGCAACTCCTCAATTTCGGGCAGCGACAACCGCTTCGCCACCACCATTGTCCCTCGCGGCTTCCCCAGTGATCCTCAATTCTCCGGAGAACTCTGCGTTCCGTATGATGAAATGGCGGAACTGGAATGGCTCTCTAACTTCGTGGAAGACTCGTTCTCCGCCGAGGAGGAGCTGAAGACGCTGCAGCTACTCTCCGGCGCCGCCGCCGCGTCCACCGCCATTGGCGCGAAACCGCAGACGCCGGAGTCCTCCTCCTCCACCGACACGCTTCCGCCGTTCGCCTCCGACGAAACCTTGCGAAACGCACCGTTTCTCCACTCGGAAACGCCTCTCCCGGGGAAGGCGCGCAGCAAGCGCTCACGGGCGGCGCCGGGGGACTGGTCCACGCGCCTGCTCCACCTGGTCGCGACGGAGCAGGAGAAGCTGCCGCAGCTAAAGGCGGAGCCGGCGAAGAAGAGAGAAGGAACGAATGCGGAGTGTTCCGGACGCAAATGCCTGCACTGCGGTACGGAGAAGACGCCGCAGTGGAGAACGGGACCGATGGGACCGAAGACGCTGTGCAACGCGTGCGGCGTAAGGTTCAAGTCCGGGAGGCTGGTGCCGGAGTACCGACCGGCAGCGAGTCCAACGTTCATGTCAACGAAGCATTCGAATTCGCATCGGAAGGTTTTGGAGCTGAGGCGGCAGAAGGAGCTGCAGCGACAGCAGCACCAGCAATTGATGAGTCAAAGTTCAATTTTCGGCGTATCCAACGGTGGGGATGAGTTCTTGATCCATCATCATCACCAGCATTGTGGGCCAGACTTTAGACACGTTATTTAG 1044 0.6034 MEVPEYFVGSFFGTGGAEQFCPPEKRHSDQKTGEPFAIDDLLDFSHADAIMSDGFFDNVAGNSTDSSTVTAVDSCNSSISGSDNRFATTIVPRGFPSDPQFSGELCVPYDEMAELEWLSNFVEDSFSAEEELKTLQLLSGAAAASTAIGAKPQTPESSSSTDTLPPFASDETLRNAPFLHSETPLPGKARSKRSRAAPGDWSTRLLHLVATEQEKLPQLKAEPAKKREGTNAECSGRKCLHCGTEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPAASPTFMSTKHSNSHRKVLELRRQKELQRQQHQQLMSQSSIFGVSNGGDEFLIHHHHQHCGPDFRHVI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00159 347 ProSiteProfiles GATA-type zinc finger domain profile. 233 269 IPR000679 GO:0006355|GO:0043565
Gma07g00159 347 CDD ZnF_GATA 238 285 IPR000679 GO:0006355|GO:0043565
Gma07g00159 347 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 236 297 - -
Gma07g00159 347 Gene3D - 234 317 IPR013088 GO:0006355|GO:0008270
Gma07g00159 347 SMART GATA_3 233 283 IPR000679 GO:0006355|GO:0043565
Gma07g00159 347 PANTHER GATA TRANSCRIPTION FACTOR 1 347 - -
Gma07g00159 347 ProSitePatterns GATA-type zinc finger domain. 239 264 IPR000679 GO:0006355|GO:0043565
Gma07g00159 347 MobiDBLite consensus disorder prediction 150 168 - -
Gma07g00159 347 Pfam GATA zinc finger 239 272 IPR000679 GO:0006355|GO:0043565
Gma07g00159 347 Coils Coil 297 317 - -
Gma07g00159 347 PIRSF Txn_fac_GATA_plant 20 325 IPR016679 GO:0003677|GO:0005634|GO:0045893
Gma07g00159 347 PANTHER GATA TRANSCRIPTION FACTOR 9 1 347 - -
Gma07g00159 347 MobiDBLite consensus disorder prediction 148 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00159 Gma-Chr7 1381699 1382866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00159 34 347 C2C2-Gata Transcription Factor Family AT4G32890 46.626 7.15e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gma07g00159 GATA 1.7e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00159 - - gmx:100776605 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00159 07 1381699 1382866 Gma07g00159 07 1381699 1382866 ECH