Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00145 ATGATGGTTCTGGTGCAAAAACCCCATTGGGGGTTGCTTCTTCTCTTTCTCCTCTTTCAGCTCCACCTTCACTGCAGCACCTGCTACCCCACAGAACCCATGAACTGTACGGACACAAGCCGTGTTTGCACTTCTTTCATGGCCTTCAAGCGTGGACCGAACCACACACTTGCTCTGATTGAAAGCATGTTTGATGTTTTGCCTGGTGACATCACAGTTGAAGGCAACGGTTGGGGTTACATGTTCATAAGGAAGAACTGTTCTTGTGCTGCTGGCATAAAAAAATACGTGTCCAACACCACTTTCACTGTGAAATCCAATGAGGGGTTGGTGTATGACATGGTGATGGATGCCTATGATGGCCTTGCTTTCCTTCCCAACACTACCAGGATGGCCAGGAATGGTGCTGTTGTGTCACTGAGGTTGTTCTGTGGCTGCTCCAGTGGACTGTGGAACTATTTAGTCAGTTATGTGATGAGAGATGGGGATAGTGTTGAGTCCTTGGCAAGCAGATTTGGGGTTAGTATGGATAGCATTGAGAGTGTGAATGGCATTGGTAATCCTGATAATGTCACTGTTGGTTCACTTTATTATATACCCCTTGATTCTGCAGTTCCTGGTGATTCTTATCCCCTGAATAATGCTGCTCCACCGGTTCCTGTTCTTTCCCCATCCTTTGATAATTTTTCAGCTGATCAAGTCAATCATAAGGCTCATGTACCCTATGGATGGATCGTTGGGGGTTTAGGAGTTGCGCTTGTTCTAATAATATTAACTGTTATTCTCTGTGTTTGTCTGAGATCATCAAATTGTTTTGCTGATACCAGAACTCATGAGAAAGATGCTGAGGGCAAGATCTCTCATAAATTCCATATTCTTCGGAACCCAAGTTTTTTTTGTGGTTCTGGAAGGTACATATGTGGCAAACATGTTGATCAGAAGCAAACAGATGGTGAATCCAGCAATCACACAATTATGGTTCCCAAAGCTTCAACTCTTTGGCCTGACGTATTTGACATGGATAAGCCTGTTGTCTTTACATATGAAGAGATTTTCTCCACTACTGATGGTTTCTCTGATTCAAGTCTACTTGGGCATGGAACATATGGTTCTGTTTATTATAGCCTCCTCCGTGATCAGGAAGTTGCTATTAAAAGAATGACAGCTACTAAAACCAAAGAGTTTATGTTAGAGATGAAAGTTTTTTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATTGGCTATGCAGCTAGTCATGAGGAGCTTTTCCTAGTATATGAATATGCTCAGAAGGGTTCACTCAAAAGCCATTTGCATGATCCTCAAAATAAGGGTCACTCCCCGCTTTCTTGGATCATGAGGGTTCAGATTGCAATTGATGCTGCTAGGGGCCTTGAATACATACATGAGCACACAAAAACTCATTATGTTCACCGTGATATCAAGACAAGTAACATTTTACTTGATGCTTCCTTTAGAGCAAAAATTTCAGATTTTGGGTTAGCGAAACTTGTTGGGAAAGCAAATGAGGGAGAAATTTCAACTACCAGAGTTGTTGGTACATATGGATATCTTGCTCCGGAATATTTGAGTGATGGTCTTGCGACCACTAAAAATGATGTCTACGCATTTGGTGTTGTCCTTTTTGAGATCATATCAGGAAAAGAGGCCATCATCCGATCAGAAGGCACAATGTCAAAAAATGCTGATAGACGTTCACTGGCATCCATAATGCTGGGAGCTCTTAGGAATTCGCCTGATTCTATGAGCATGTCAAGCTTGAGAGAATATATTGATCCAAATATGATGGATCTGTATCCCCATGATTGTGTATTTAAGTTGGCCATGTTGGCAAAGCAATGTGTGGATGAGGACCCCATCTTACGACCTGATATGAGACAAGTTGTGATATCCCTTTCACAGATTCTGCTGTCTTCAGTTGAGTGGGAAGCAACTCTAGCTGGGAATAGCCAGGTTTTCAGTGGCCTTGTTCAGGGAAGATAG 2007 0.424 MMVLVQKPHWGLLLLFLLFQLHLHCSTCYPTEPMNCTDTSRVCTSFMAFKRGPNHTLALIESMFDVLPGDITVEGNGWGYMFIRKNCSCAAGIKKYVSNTTFTVKSNEGLVYDMVMDAYDGLAFLPNTTRMARNGAVVSLRLFCGCSSGLWNYLVSYVMRDGDSVESLASRFGVSMDSIESVNGIGNPDNVTVGSLYYIPLDSAVPGDSYPLNNAAPPVPVLSPSFDNFSADQVNHKAHVPYGWIVGGLGVALVLIILTVILCVCLRSSNCFADTRTHEKDAEGKISHKFHILRNPSFFCGSGRYICGKHVDQKQTDGESSNHTIMVPKASTLWPDVFDMDKPVVFTYEEIFSTTDGFSDSSLLGHGTYGSVYYSLLRDQEVAIKRMTATKTKEFMLEMKVFCKVHHANLVELIGYAASHEELFLVYEYAQKGSLKSHLHDPQNKGHSPLSWIMRVQIAIDAARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGKANEGEISTTRVVGTYGYLAPEYLSDGLATTKNDVYAFGVVLFEIISGKEAIIRSEGTMSKNADRRSLASIMLGALRNSPDSMSMSSLREYIDPNMMDLYPHDCVFKLAMLAKQCVDEDPILRPDMRQVVISLSQILLSSVEWEATLAGNSQVFSGLVQGR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00145 668 PANTHER BNAA06G02020D PROTEIN 34 668 - -
Gma07g00145 668 Gene3D Phosphorylase Kinase; domain 1 335 429 - -
Gma07g00145 668 SMART serkin_6 358 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00145 668 Pfam LysM domain 157 194 IPR018392 -
Gma07g00145 668 Pfam Protein tyrosine and serine/threonine kinase 363 638 IPR001245 GO:0004672|GO:0006468
Gma07g00145 668 Gene3D Transferase(Phosphotransferase) domain 1 431 655 - -
Gma07g00145 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Gma07g00145 668 SUPERFAMILY Protein kinase-like (PK-like) 334 640 IPR011009 -
Gma07g00145 668 CDD LysM 155 199 IPR018392 -
Gma07g00145 668 SMART LysM_2 156 200 IPR018392 -
Gma07g00145 668 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 34 668 IPR044812 GO:0019199|GO:0045087
Gma07g00145 668 ProSiteProfiles Protein kinase domain profile. 358 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00145 668 ProSiteProfiles LysM domain profile. 155 199 IPR018392 -
Gma07g00145 668 SUPERFAMILY LysM domain 155 200 IPR036779 -
Gma07g00145 668 Gene3D LysM domain 152 205 IPR036779 -
Gma07g00145 668 ProSitePatterns Protein kinases ATP-binding region signature. 364 385 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00145 Gma-Chr7 1236000 1242184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00145 32 668 Receptor kinase-like Gene Family AT1G51940 68.217 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma07g00145 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00145 - - gmx:100797509 1316.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00145 07 1236000 1242184 Gma07g00145 07 1236000 1242184 ECH
Gma07g00145 07 1236000 1242184 Gma08g01842 08 16537315 16544168 GST
Gma13g03172 13 45847306 45853398 Gma07g00145 07 1236000 1242184 PCT
Gma15g00194 15 1570251 1575530 Gma07g00145 07 1236000 1242184 PCT
Gma07g00145 07 1236000 1242184 Gma13g03172 13 45847306 45853398 PCT
Gma07g00145 07 1236000 1242184 Gma15g00194 15 1570251 1575530 PCT