Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00144 ATGTGGCAAAGAAGCCACAAGTCATCAGAGGAGAGGAAGCTGGAGCTTAGGCTTGGTCCACCTGGTGAAGAGTCTCTCAATGAAAGCATCAGAAAATGCAACAGAGAAAGACGTAGAAATGAATCACCACTCACTCTTGGTTGCTTCTCAACTCAGAAAATTTTTACTTCTGACACGCCAGGTCCAGGTGGAGCTATGTTGCCCTCTGCATGGCCTTCCACATCCTATCATCACCAAGACCAGGCTAAAGCTAAAGCTTCATCATTTCTACAGCTCCAATCAAGTCCGCAAAACATGATACTGATGGGAAAGGATGTGTCACAATTCTCTTGTGTAGAGAAGAAGTCATTCTCACCCTCTTGTGCAAATCCAGCGGTGTCCAAAAGAACTGCTTCAGGTCCAGTAGTGGGTTGGCCTCCAATTCGTTCCTTCAGGAAGAACATTGCAAGTGGAAGCACTTCTAATTCTAAGTTGCCTTCTGGGTCCCAGCAGCAACATCAAAATGTTGTTCCAGGCAAGGTTGCTAGCCAAAAACCTACAGACAACTCAGGTAAAGGCTTGTTTGTGAAGATCAATATGGATGGTGTCGCCATTGGGAGAAAAGTGGACATCAATGCTTATGACAGCTATGAAAAACTTTCCTCTGCTGTTGATGAGCTCTTTAGGGGCCTCCTTGCAGAGATGAAGTTATCTCATATTGCCTCTTCCCAATGCTGTTCTGGTCAAAGAGATTCCTGTGCTGGTGGAATTCAAAACAAGGAACAGGAAGAGAAATCCAATACGGGTTTATTGGTTGGAAGTGGGGAATATACTCTTGTTTATGAGGATAATGAAGGAGACAGGATGCTTGTTGGAGATGTGCCGTGGCACATGTTTGTGTCGACAGTGAAGAGGCTGAGGGTGTTGAAGAGTTCTGATCTTCCTGCTTTTACCCTTGGTAGTAAGCAAGACTAG 954 0.4507 MWQRSHKSSEERKLELRLGPPGEESLNESIRKCNRERRRNESPLTLGCFSTQKIFTSDTPGPGGAMLPSAWPSTSYHHQDQAKAKASSFLQLQSSPQNMILMGKDVSQFSCVEKKSFSPSCANPAVSKRTASGPVVGWPPIRSFRKNIASGSTSNSKLPSGSQQQHQNVVPGKVASQKPTDNSGKGLFVKINMDGVAIGRKVDINAYDSYEKLSSAVDELFRGLLAEMKLSHIASSQCCSGQRDSCAGGIQNKEQEEKSNTGLLVGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSDLPAFTLGSKQD 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00144 317 MobiDBLite consensus disorder prediction 1 19 - -
Gma07g00144 317 ProSiteProfiles PB1 domain profile. 186 304 IPR000270 GO:0005515
Gma07g00144 317 SUPERFAMILY CAD & PB1 domains 179 301 - -
Gma07g00144 317 Pfam AUX/IAA family 14 307 IPR033389 -
Gma07g00144 317 MobiDBLite consensus disorder prediction 1 42 - -
Gma07g00144 317 Gene3D - 181 315 - -
Gma07g00144 317 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 316 IPR003311 GO:0005634|GO:0006355
Gma07g00144 317 MobiDBLite consensus disorder prediction 28 42 - -
Gma07g00144 317 MobiDBLite consensus disorder prediction 149 181 - -
Gma07g00144 317 PANTHER AUXIN-RESPONSIVE PROTEIN IAA26 3 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00144 Gma-Chr7 1223272 1226557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00144 140 315 B3 DNA Binding Superfamily AT4G23980 25.000 1.16e-10 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma07g00144 AUX_IAA 4.1e-66 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00144 K14484 - gmx:100793822 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00144 07 1223272 1226557 Gma08g01841 08 16523281 16525931 ECH
Gma07g00144 07 1223272 1226557 Gma07g00144 07 1223272 1226557 ECH
Gma07g00144 07 1223272 1226557 Gma08g01841 08 16523281 16525931 GST
Gma13g03168 13 45808994 45811705 Gma07g00144 07 1223272 1226557 PCT
Gma15g00198 15 1602234 1605496 Gma07g00144 07 1223272 1226557 PCT
Gma07g00144 07 1223272 1226557 Gma13g03168 13 45808994 45811705 PCT
Gma07g00144 07 1223272 1226557 Gma15g00198 15 1602234 1605496 PCT