Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00142 ATGGGGAAAGCTAGCAGGTGGTTGAAAGGGTTGTTGGGGATGAAGAAGGAGAAGGACCATAGTGACAATTCAGGCTCATTGGCTCCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCCAAGCCAGGGAAGGATGTGCCACCTTCAGTTCCTGCCACTGATAACACCTGGCTCAGATCCTATATTTCTGAGACAGAGAATGAGCAGAACAAGCATGCAATTGCGGTGGCAGCCGCCACCGCGGCTGCTGCTGATGCCGCCGTGGCCGCTGCGCAGGCGGCTGTGGCAGTTGTGAGGCTCACAAGCCAGGGGAGAGGGGCATTGTTCAGTGGAAGCAGGGAGAAGTGGGCTGCTGTGAAGATCCAAACTTTTTTTAGAGGCTACTTGGCACGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATTTGGTTAGAAAGAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACTGCTGTTAGAACACAGCGAGCTCGTCGCTCGATGAGCAAAGAAAACAGATTTCTACCTGAAGTTCTTGCAAGAAAATCTGTGGAACGATTTGATGAAACAAGGAGTGAATTCCACAGTAAAAGGCTACCTACATCCTATGAAACATCCTTGAATGGTTTTGATGAGAGCCCCAAGATTGTTGAAATTGACACATACAAGACTCGATCAAGGTCTAGGCGCTTTACCTCTACAATGTCTGAGTGTGGAGAAGACATGTCCTGTCATGCAATCTCATCCCCTCTTCCTTGTCCAGTCCCTGGTCGAATCTCAGTTCCTGATTGCAGATACATTCAAGATTTTGATTGGTACTACAATGTTGATGAGTGTAGATTCTCCACAGCTCATAGCACCCCACGTTTCACAAACTATGTGAGGCCTAATGTTCCAGCTACACCAGCCAAGAGTGTTTGTGGAGACACCTTCTTCAGACCTTACTCCAATTTCCCCAACTACATGGCCAATACTCAGTCATTCAATGCAAAACTAAGGTCTCATAGTGCTCCAAAGCAAAGACCTGAACCCAAGAAAAGGCTCTCACTCAATGAAATGATGGCAGCAAGAAACAGCATAAGTGGTGTTAGAATGCAAAGGCCATCATCCAATTTCTTCCAGACTCAAGAAGACTCATGGAATTTTTGA 1191 0.4668 MGKASRWLKGLLGMKKEKDHSDNSGSLAPDKKEKKRWSFAKPGKDVPPSVPATDNTWLRSYISETENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGALFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRTQRARRSMSKENRFLPEVLARKSVERFDETRSEFHSKRLPTSYETSLNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDMSCHAISSPLPCPVPGRISVPDCRYIQDFDWYYNVDECRFSTAHSTPRFTNYVRPNVPATPAKSVCGDTFFRPYSNFPNYMANTQSFNAKLRSHSAPKQRPEPKKRLSLNEMMAARNSISGVRMQRPSSNFFQTQEDSWNF 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00142 396 MobiDBLite consensus disorder prediction 10 41 - -
Gma07g00142 396 PANTHER IQ-DOMAIN 5-RELATED 1 386 - -
Gma07g00142 396 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Gma07g00142 396 MobiDBLite consensus disorder prediction 1 52 - -
Gma07g00142 396 Pfam Protein of unknown function (DUF4005) 312 375 IPR025064 -
Gma07g00142 396 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Gma07g00142 396 PANTHER - 1 386 - -
Gma07g00142 396 SMART iq_5 113 135 IPR000048 GO:0005515
Gma07g00142 396 SMART iq_5 136 157 IPR000048 GO:0005515
Gma07g00142 396 Gene3D - 67 140 - -
Gma07g00142 396 Pfam IQ calmodulin-binding motif 141 155 IPR000048 GO:0005515
Gma07g00142 396 Pfam IQ calmodulin-binding motif 116 135 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00142 Gma-Chr7 1192929 1194851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00142 1 379 IQD Protein Family AT3G16490 55.980 1.14e-114 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00142 - - gmx:100797686 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00142 07 1192929 1194851 Gma07g00142 07 1192929 1194851 ECH
Gma07g00142 07 1192929 1194851 Gma08g01838 08 16495056 16496852 GST
Gma13g03166 13 45782604 45784257 Gma07g00142 07 1192929 1194851 PCT
Gma15g00199 15 1626806 1628463 Gma07g00142 07 1192929 1194851 PCT
Gma07g00142 07 1192929 1194851 Gma13g03166 13 45782604 45784257 PCT
Gma07g00142 07 1192929 1194851 Gma15g00199 15 1626806 1628463 PCT