Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00133 ATGGCTGATAATCCTGATCTTTGCGTGTCAGACTCATGCAAAAAGAACTTTGTTACACCACTGGTTGCATCACTTTCATCAGCACAAGGTTATAAGGAATTCCGATCAGAGGCACAACTTCTAGTGATTGTTCATCATAGAAATTTAGTATCTCTCATTGGATACTGTGGTGAAGGTGAAAGTAAAGCATTGATTTATGAATACATGGCCAATGGAAATCTCCACCAGCACTTATCAGTGAACAATCCAAATGTCTTGAAGTGGAACCAAAATTAA 276 0.3804 MADNPDLCVSDSCKKNFVTPLVASLSSAQGYKEFRSEAQLLVIVHHRNLVSLIGYCGEGESKALIYEYMANGNLHQHLSVNNPNVLKWNQN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00133 91 PANTHER OS07G0107800 PROTEIN-RELATED 24 90 - -
Gma07g00133 91 Gene3D Transferase(Phosphotransferase) domain 1 16 91 - -
Gma07g00133 91 SUPERFAMILY Protein kinase-like (PK-like) 27 90 IPR011009 -
Gma07g00133 91 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 24 90 - -
Gma07g00133 91 Pfam Protein tyrosine and serine/threonine kinase 27 88 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00133 Gma-Chr7 1123323 1124006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00133 24 90 Receptor kinase-like Gene Family AT2G19230 59.701 5.71e-24 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gma07g00133 PK_Tyr_Ser-Thr 3.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00133 - - aprc:113851010 120.938