Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00127 ATGACAGATGAAGCTATCTCCACATTGAATTTGAAAAATCCAACTCTTAAACAATTAATTAAGGATTACTCTATAGTGTTTTGGTTCTGGCAGCAGTTGATCTACAACTGGGAATTGGTAACAAGGATCACTTTCTCCTACAAGATTCAACTAGATTTCTTGTACTTTCATTTTCATAAAAAATTACATTCATCTATGGATGGTCTTAGTTGGGATGCCTCACAACTGTGGGGTACTATTCAGCAACCACCAGTCTTTGGAGGAGGTTACTCCATGCCCCTCAATGTTCTCAATCAAATACAAGAGATGCAGAAAGCTCAAACAGGTCATGTATTCTCAAATTCTGAAAGAGCGATTTATCAGTCCGCAGGTGCTACCACCACTTCCTCAGAGATAATGGATGTGATGCAAAAACAAGACAAAAATCTATCACAGCATGTGTCTACCATGCCGGTGAAACCAGGAGCTGGAGCCAGTTGGGGAGAAACTTTAACATCCCAATCATACCCATCCCTATCAGTCAATGGACCTCACAGTATGAACCTGATTAGCAACTACACGCCAGATTTCAACATGGCCCACCACCAACAACTTGTCAATGGCTCACAAAATGGGAAGGGTGGTTGCTCTCTTGAGCCTTTTGACTGCTTGATTTCAGCTACCAACAGCAACACAGACACTTCTGTTGAAGATGATGATGGGATCTCAATGATTTTATCTGACTGTGGAAACCTGTGGAACAACTTCAGCTATGGCAGTGTAGCTTCCACTGGTGAATCTGAGAGCAATGCTTCCAATGGTAGAAACAAAGACATGCAGTGTCCAGTCAATGAAGTTGATGAAACAGTTTCTCAAACAGTAGAATCAGAGGCTAATTGTTCAAAGAGGAGTCATGATCAATCTAAAATGATCCAAGTTGGTGATTCCTGCTTCAGTATTGTTCAGAATTCTTCTCCAATTGAAGAAGGTGGTTTCAGACTTATCTCAGATAATCCACCAGAATGCAAGAAACCCAGATGGGATATGAGTTCCTCCTCAAATAATATCAATTTCCAGCAACCAAATTCATCCATTTCTTCTTCCATTGAAGAGCCTGATCCAGAGGCAATTGCACAAATGAAGGAAATGATATATAGGGCTGCAGCTTTTAGGCCAGTGAACTTTGGCTTGGAGGTGGTTGAAAAGCTAAAGAGGAAGAATGTGAAGATATCAACTGATCCACAAACTGTGGCTGCAAGGCACAGAAGGGAGAGAATAAGTGAGAAGATTAGGGTTTTGCAGAAGCTTGTGCCTGGGGGAAGCAAGATGGACACAGCATCAATGCTTGATGAGGCTGCAAACTACCTCAAGTTTCTCAGGTCACAGGTGAAGGCACTGGAAAGTCTAGGGAACAAAGTTGATGCAATGAATTGTCCTCCTACTAGCATTGCCTTCTCTTTCAACCCTTCTTTTCCCATGCAAACACCCCTCAGTCACATCCATCATTCCTAG 1491 0.4205 MTDEAISTLNLKNPTLKQLIKDYSIVFWFWQQLIYNWELVTRITFSYKIQLDFLYFHFHKKLHSSMDGLSWDASQLWGTIQQPPVFGGGYSMPLNVLNQIQEMQKAQTGHVFSNSERAIYQSAGATTTSSEIMDVMQKQDKNLSQHVSTMPVKPGAGASWGETLTSQSYPSLSVNGPHSMNLISNYTPDFNMAHHQQLVNGSQNGKGGCSLEPFDCLISATNSNTDTSVEDDDGISMILSDCGNLWNNFSYGSVASTGESESNASNGRNKDMQCPVNEVDETVSQTVESEANCSKRSHDQSKMIQVGDSCFSIVQNSSPIEEGGFRLISDNPPECKKPRWDMSSSSNNINFQQPNSSISSSIEEPDPEAIAQMKEMIYRAAAFRPVNFGLEVVEKLKRKNVKISTDPQTVAARHRRERISEKIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGNKVDAMNCPPTSIAFSFNPSFPMQTPLSHIHHS 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00127 496 CDD bHLH_AtIND_like 404 462 - -
Gma07g00127 496 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 139 490 IPR045843 GO:0003700|GO:0006355
Gma07g00127 496 PANTHER TRANSCRIPTION FACTOR BHLH87 139 490 - -
Gma07g00127 496 Coils Coil 442 462 - -
Gma07g00127 496 Pfam Helix-loop-helix DNA-binding domain 413 452 IPR011598 GO:0046983
Gma07g00127 496 Gene3D - 407 470 IPR036638 GO:0046983
Gma07g00127 496 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 403 452 IPR011598 GO:0046983
Gma07g00127 496 SMART finulus 409 458 IPR011598 GO:0046983
Gma07g00127 496 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 409 465 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00127 Gma-Chr7 1078402 1080274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00127 205 495 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 53.795 1.45e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma07g00127 HLH 3.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00127 - - gmx:100793975 835.099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00127 07 1078402 1080274 Gma07g00127 07 1078402 1080274 ECH
Gma07g00127 07 1078402 1080274 Gma08g01824 08 16278854 16280847 GST
Gma13g03159 13 45714516 45716483 Gma07g00127 07 1078402 1080274 PCT
Gma15g00208 15 1795858 1797195 Gma07g00127 07 1078402 1080274 PCT
Gma07g00127 07 1078402 1080274 Gma13g03159 13 45714516 45716483 PCT
Gma07g00127 07 1078402 1080274 Gma15g00208 15 1795858 1797195 PCT