Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00109 ATGGATCTATATGCAGATGATTTCTCATGGACTTGTCTGAAGGATTTTGAATTCACTTCTTTCTGTTCGCAAAGAACCACAATAGACACCATAAATCTACTTTTTGTGTGTTTCTTCTACACGTCTATGATTATCAGTATAATCAGAAGATGTTCTATAAGTTGTAGTTTCAGGACAAAATGGACTTTCCTTGTTGCCTCTATCTGCTGCGCTATTATTAGCATTGCTTTTTACAGTATTGGCTTGTGGATTCTCATAGTCAAAACTGATAACACCAAGCAACTGAGCTGGGTAGCTTGCGTTGTCAGAGGATTTGTTTGGACTTCTTTGGCAGTTTCTCTGCTTGTTCAGAGAGAAAAATGGATCAAAATTCTGAACTGTGCCTGGTGGACATGTTCCTGTGTACTGGTTTCATCTCTCATCATAGAGATTCTGTTGAGAAAGCATGCAATAGAAATTTTTGATATAGTACAATGGCTTACACACTTCCTTCTTCTGTTTTGTGCCTTCCAAAATCTATGTTACTATGTCTCTCAAAGTCTGCCAGAAAGCTTATCTGAACCACTGTTAGCTCAAGAAGTTGACACTAAACAAACAGAACTAGGCCATAGTACCTTTCTCAGCAAATTGACTTTCTCTTGGGTTAACTCCTTACTCCGTCTGGGTTACTCAAAGCCACTAGCTCTTGAAGACATCCCTTCCCTTCTTTCTGAAGATGAAGCAGAATTTGCGTACCAAAACTTTATGCATACATGGGAATCCCTTGTAAGGGAGAGTAGCAAGGACAATACCAAAAACTTGGTTCTCTGGTCTGTTGTTAGAACTCACTTAAAAGAGAACATACTCATAGCTTTTTATGCACTACTTAGAACCATAGCTGTGACTGTTTCGCCTTTAATACTTTATGCTTTTGTCAACTACTCAAATAGCAGGGATGCCAAGCAAACAAATCTCAAAGAAGGTCTTTCCATAGTTGGTTTTCTTATTCTCTCCAGAGTGGTTGATTCTGTGTCCCAGAGACATTGGTTTTTTGATTCCAGGAGATCAGGATTGAAGATAAGATCAGCTCTGATGGTGGCAGTGTATAAAAAACAGCTAAAGCTTTCTAGCTCGGCAAGGAGAAGGCACTCAACAGGTGAAATTGTGAATTACATTGCTGTTGACACATATCGTATGGGAGAATTTCCATGGTGGTTTCATATATCATGGACTTCTGCAGTACAACTTGTTCTCTCTGTTGGTGTCCTTTTTGGTGTTGTTGGTGTTGGTGCTCTTCCTGGTTTAGTCCCACTTGTTATATGTGGACTTATCAATGTACCATTTGCTAAGATCCTACAACATTGTATGGCACAGTTCATGATTTCACAGGATGAGCGTCTTAGATCAACTTCAGAAATTCTGAATAGCATGAAAATCATTAAGTTACAATCCTGGGAGGACAAATTCAAGAATTTGGTTGAGAACCTACGTGCTAAAGAGTTCATCTGGCTGTCTAAGTCACAGATGATGAAATCTTATGGAACATTTCTGTATTGGATGTCACCTACCATCGTTTCTGCTGTTGTTTTCCTCGGTTGTGCTCTTTTCAATAGTGCCCCGTTGAATGCTGGAACCATTTTCACAGTTTTTGCAACGTTGAGGAACTTGTCAGAACCTGTTCGAATGATTCCAGAGGCTCTATCCATGATGATCCAAGTTAAGGTATCCTTTGATCGTCTCAATACCGTTTTGCTTGATGAAGAGCTAGATAGTAGCAATGCTAACAGAAGAAATATAAACCAAAGTTCGGTTAATGCTGTGGAAATCCAAGCCGGAAATTTCATTTGGGATCACGAATCAGTATTTCCAACTTTAAGAGATGTGAATTTACAAATTGAACAAGGACAGAAAATCGCAGTTTGTGGGCCTGTTGGCGCTGGAAAATCATCTCTTTTATTTGCAGTACTTGGAGAGTTTCCAAAGATCTCAGGAACCGTTAATGTGTCTGGCACTGTAGCCTATGTTTCTCAAACTTCTTGGATACAAAGTGGGACAGTTCGAGATAATATACTCTTTGGAAAGCCAATGGACAAAACAAGATATGATGATGCCATTAAAGTTTGTGCTTTAGACAAGGATATTAATGATTTTAGCCATGGTGATCTGACTGAAATAGGTCAGCGAGGGATTAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGTGCAGTCTACAATGACGCTGACATCTATCTCCTTGATGACCCTTTCAGTGCAGTTGATGCTCACACTGCTGCTATCCTCTTCAATGACTGTGTAATGATGGCTCTAAGAGAGAAAACAGTCATTCTAGTCACTCATCAAGTGGAGTTTCTCTCACAAGTGGATACAATCCTGGTAATGGAAGGTGGAAAAGTTACTCAAGCAGGTAATTATGTGAATCTCTTGACATCTGGGACAGCCTTTGAACAACTTGTGAGCGCTCATAAGGAAGCAATTTCAGAGTTGGAACAAAATAATGAAAACAAAACTCATACAGAAGAGTCTCAAGGTTTTTATCTCACTAAAAACCAAAGTGAGGGGGAGATTTCTTACAAGGGTCAACTTGGGGTACAGCTTACACAAGAAGAAGAAAAAGAGATTGGTGATGTTGGCTGGAAGACAATCTGGGATTATATTTCATTTTCCAGGTGTTCAATGATGCTGTGTTGGATCATATTGGGACAATTTGCTTTTGTTGTTTTACAGGCTGCGTCAACGTTTTGGCTTGTTCAAGCCATTGAAATTCCAAAATTAAGTAGTGTCACCTTGATTGGAGTTTACTCATTAATTTCATTTGGTGGTACTGTATTTGCATTTCTAAGGACTAGCATTGGTGCACACCTCGGATTAAAAGCTTCTACAGCCTTCTTCTCAAGTTTCACTACTTCTATCTTCAATGCTCCTATGCTGTTCTTTGATTCAACCCCTGTAGGAAGGATTTTAACCCGCGCATCATCAGATTTAACTATTTTGGACTTTGATATACCCTTTTCCATCACTTTTGTAGCTTCTGTTCCAATTGAAATTTTGATGATAATTGGTATAATGGTTTACGTAACATGGCAAGTTCTCATTGTTGCTGTTCCAGCAATGGTTGCATCAAAATATGTTCAGGGATATTATCAAGCCTCAGCAAGGGAATTGATAAGGATTAATGGAACCACAAAAGCTCCTGTCATGAATTTTGCAGCTGAGACATCACTTGGATTGGTTACTGTAAGAGCATTTAATATGGCAGACAGATTTTTTAAAAATTACTTAAAACTTGTGGACACAGACGCAGCACTGTTCTTTTATTCTAATGCGGCCATGGAATGGTTAGTTTTAAGGATTGAAACTCTTCAAAATTTGACAGTCATCACTGCAGCTTTGCTGCTTGTTCTAGTTCCTCAGGGATACGTGTCCCCAGGCCTTGTGGGGCTGTCTCTCTCTTATACATTCACCTTGACAGGAACCCAAATATTTTTGACTCGATGGTATTGCAACTTATTAAACTATATTATCTCTGTTGAGAGAATCAAGCAATTCATTCAGCTTCCAGAAGAGCCTCCTGCCATTGTGGAGGACAACCGGCCTCCATCTTCATGGCCTTCCAAAGGCAGGATTGACCTTCAAGCCTTAGAGGCAAAATATCGTCCTAATGCTCCATTAGTGCTTAAGGGTATCACTTGTACGTTTAAGGAAGGAAGTAGAGTGGGAGTTGTAGGAAGGACTGGAAGTGGAAAAAGTACGCTCATAAGTGCTCTTTTTCGCTTAGTTGAGCCAGCAAGTGGTGATATTCTTATAGATGGGATTAACATATGCTCAATAGGGTTGAAGGATTTGAAAATAAAGCTAAGCATCATCCCTCAAGAACCAACTCTTTTCAAGGGAAGCATTAGAACCAACTTGGACCCTCTAGGCCTGTACTCAGATGATGATTTATGGAAGGCATTAGAAAAATGTCAGCTTAAGGAAACTATCAGCCGTCTACCAAATCTCTTGGACTCTTTGGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAGCGCCAACTATTTTGTCTTGGAAGAGTACTACTTAAGAGGAACAGAATTCTAGTTCTGGATGAAGCTACCGCATCCATTGACTCTGCCACAGATGCCATTCTACAACAAATAATTAGACAAGAATTTGCCAAATGCACAGTTATAACAGTGGCTCACAGGGTTCCAACTGTAATAGATAGTGACATGGTCATGGTCCTCTCCTATGGGAAACTTGTGGAATATGATGAGCCTTCAAAGCTAATGGACACCAACTCCTCGTTCTCTAAGCTGGTAGCTGAATATTGGTCCAGCTGCAGAAAGAATTCTCCACAAACGTTAGCAGGCAGCAACATTGAATAA 4395 0.3991 MDLYADDFSWTCLKDFEFTSFCSQRTTIDTINLLFVCFFYTSMIISIIRRCSISCSFRTKWTFLVASICCAIISIAFYSIGLWILIVKTDNTKQLSWVACVVRGFVWTSLAVSLLVQREKWIKILNCAWWTCSCVLVSSLIIEILLRKHAIEIFDIVQWLTHFLLLFCAFQNLCYYVSQSLPESLSEPLLAQEVDTKQTELGHSTFLSKLTFSWVNSLLRLGYSKPLALEDIPSLLSEDEAEFAYQNFMHTWESLVRESSKDNTKNLVLWSVVRTHLKENILIAFYALLRTIAVTVSPLILYAFVNYSNSRDAKQTNLKEGLSIVGFLILSRVVDSVSQRHWFFDSRRSGLKIRSALMVAVYKKQLKLSSSARRRHSTGEIVNYIAVDTYRMGEFPWWFHISWTSAVQLVLSVGVLFGVVGVGALPGLVPLVICGLINVPFAKILQHCMAQFMISQDERLRSTSEILNSMKIIKLQSWEDKFKNLVENLRAKEFIWLSKSQMMKSYGTFLYWMSPTIVSAVVFLGCALFNSAPLNAGTIFTVFATLRNLSEPVRMIPEALSMMIQVKVSFDRLNTVLLDEELDSSNANRRNINQSSVNAVEIQAGNFIWDHESVFPTLRDVNLQIEQGQKIAVCGPVGAGKSSLLFAVLGEFPKISGTVNVSGTVAYVSQTSWIQSGTVRDNILFGKPMDKTRYDDAIKVCALDKDINDFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTAAILFNDCVMMALREKTVILVTHQVEFLSQVDTILVMEGGKVTQAGNYVNLLTSGTAFEQLVSAHKEAISELEQNNENKTHTEESQGFYLTKNQSEGEISYKGQLGVQLTQEEEKEIGDVGWKTIWDYISFSRCSMMLCWIILGQFAFVVLQAASTFWLVQAIEIPKLSSVTLIGVYSLISFGGTVFAFLRTSIGAHLGLKASTAFFSSFTTSIFNAPMLFFDSTPVGRILTRASSDLTILDFDIPFSITFVASVPIEILMIIGIMVYVTWQVLIVAVPAMVASKYVQGYYQASARELIRINGTTKAPVMNFAAETSLGLVTVRAFNMADRFFKNYLKLVDTDAALFFYSNAAMEWLVLRIETLQNLTVITAALLLVLVPQGYVSPGLVGLSLSYTFTLTGTQIFLTRWYCNLLNYIISVERIKQFIQLPEEPPAIVEDNRPPSSWPSKGRIDLQALEAKYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPASGDILIDGINICSIGLKDLKIKLSIIPQEPTLFKGSIRTNLDPLGLYSDDDLWKALEKCQLKETISRLPNLLDSLVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDAILQQIIRQEFAKCTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKNSPQTLAGSNIE 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00109 1464 CDD ABCC_MRP_domain2 1209 1429 - -
Gma07g00109 1464 Coils Coil 821 841 - -
Gma07g00109 1464 Pfam ABC transporter 618 752 IPR003439 GO:0005524
Gma07g00109 1464 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 281 565 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma07g00109 1464 SMART AAA_5 1237 1429 IPR003593 -
Gma07g00109 1464 SMART AAA_5 627 800 IPR003593 -
Gma07g00109 1464 Gene3D - 1194 1445 IPR027417 -
Gma07g00109 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1201 1444 IPR027417 -
Gma07g00109 1464 SUPERFAMILY ABC transporter transmembrane region 884 1193 IPR036640 GO:0005524|GO:0016021
Gma07g00109 1464 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 61 1454 - -
Gma07g00109 1464 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 61 1454 - -
Gma07g00109 1464 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 599 822 IPR027417 -
Gma07g00109 1464 Pfam ABC transporter transmembrane region 917 1160 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma07g00109 1464 Pfam ABC transporter transmembrane region 281 545 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma07g00109 1464 ProSitePatterns ABC transporters family signature. 725 739 IPR017871 GO:0005524
Gma07g00109 1464 Gene3D ABC transporter type 1, transmembrane domain 257 581 IPR036640 GO:0005524|GO:0016021
Gma07g00109 1464 Gene3D ABC transporter type 1, transmembrane domain 862 1192 IPR036640 GO:0005524|GO:0016021
Gma07g00109 1464 CDD ABC_6TM_ABCC_D1 282 573 IPR044746 GO:0140359
Gma07g00109 1464 CDD ABCC_MRP_domain1 600 800 - -
Gma07g00109 1464 Gene3D - 607 855 IPR027417 -
Gma07g00109 1464 SUPERFAMILY ABC transporter transmembrane region 269 579 IPR036640 GO:0005524|GO:0016021
Gma07g00109 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1213 1445 IPR003439 GO:0005524
Gma07g00109 1464 CDD ABC_6TM_ABCC_D2 895 1186 IPR044726 GO:0140359
Gma07g00109 1464 Pfam ABC transporter 1228 1376 IPR003439 GO:0005524
Gma07g00109 1464 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 899 1174 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma07g00109 1464 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 602 823 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00109 Gma-Chr7 906371 912225 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00109 600 864 Calmodulin-binding Proteins AT2G36910 25.874 5.31e-23 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00109 - - gmx:100790301 2769.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00109 07 906371 912225 Gma07g00109 07 906371 912225 ECH