Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00105 ATGAGTCGAGAGCAACAGAAGCGGGGGAAGCAAGAGAAAGGTTCTGATGGTGCTGAGAAGGTCATTGTTGCCGTTAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCCCTCAGTCATGTTGTTCAACCTGGGGATTGCATTACACTACTAGTGGTTGTGCCTTCACAAAGTTCAGGCAGAAGATTATGGGGTTTTCCTAGATTTGCTGGTGATTGTGCCAGTGGTATTAAGAAGTACCCTCCAGGAACAATATCAGAGCAGAAGAGTGATCTCACTGATTCTTGTTCTCAGATGATCCTTCAGCTCCATAATGTCTATGATCCAAACAAGATAAATGTCAGGATTAAAATTGTTTCCGGATCACCTTGTGGAGCAGTGGCTGCAGAAGCCAAAAAAACACAAGCCAATTGGGTCGTATTAGACAAACAGCTCAAACATGAGGAAAAGCGATGCATGGAAGAACTGCAGTGTAACATTGTGGTTATGAAGCGTTCTCAACCTAAAGTACTGCGCTTGAATTTGATTGGACCACAAAAGAAGGATGTTGAAGAAGCAGGTCCATCACCTTCTGAGCAAGATGACATGCCTGAAAACCGAACCAAAATAAAGCTTGATTCCTTAAATTCTATCAAAGGACCAACTGTAACTCCAACTAGCAGTCCTGAGCTAGGGACACCATTCACTGCAACTGAAGCTGGTACTTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCATTCTTCATCTCAGAGATGAATGGTGAGTTCAAAAAAGAGGAAACTATCAAGGAAAGTCAAGAACTGGTTGATACTAATTCAGACACAGAAAGTGAAAGTCTGTCCACATCTTCAGCAAGCATGAGATACCAGCCATGGATCACAGAATTGCTTTTACATCAACAATCATCACAACGCAATGAAGAGAGATCAGATATATCTCACGGTATTCCTCAAGCATCTACAACCAGAGCTTTCCTAGAAAAGTATTCTAGGCTTGATAGAGGAGCTGGATTTGAAATCTCAACCTATAGAAATGACATGGATTTCAGTGGAAATTTAAGAGAAGCAATAGCATTATCCGGAAACGCCCCACCTGGTCCCCCTCCATTATGTTCAATATGTCAACACAAGGCACCTGTTTTTGGAAAACCTCCAAGGTGGTTTACCTATTCGGAGTTAGAACTTGCTACTGGTGGTTTTTCACAGGCCAACTTCTTGGCAGAAGGAGGGTTTGGATCTGTTCATAGAGGGGTCCTACCAGAAGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTTTGCTCAGAGGTGGAAGTCCTGAGCTGTGCtcagcaccggaatgttgttatgctcattgggttctgtatagaggataagagaaggctactggtttatgagtatatATGCAATGGATCATTGGATTCACATTTATATGGGCGACAACGGGATACATTAGAATGGTCTGCACggcaaaaaattgctgttggagctgctcgcggtttacgatatcttcatgaagagtgtagagtgggttgtattatccaccgtgacatgaggccaaacaatattctcATAACTCATGATTTTGAACCTCTGGTTGGCGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACGGGTGTGGAAACTAGAGTGATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTTTATTCCTTTGGGGTGGTATTAGTGGAGCTTGTTACAGGGAGAAAAGCTGTGGATCTCACTAGGCCAAAGGGGCAGCAGTGCCTTACTGAGTGGGCACGACCACTGTTGGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTTGGTAAGCACTATTCAGAACATGAGGTCTATTGCATGCTGCATGCTGCATCATTATGCATACAGCGAGATCCTCAATGTAGACCACGCATGTCACAGGTTCTCCGAATACTAGAAGGTGACATGGTGATGGACTCAAATTACATCTCAACTCCAGGTTATGATGCAGGAAACCGGAGTGGTAGACTTTGGTCAGAGCCGTTACAAAGGCAGCAGCATTATAGCGGTCCCCTTTTAGAAGAGTCTCTGGAATCCTTCAGTGGAAAGCTATCCCTTGACAAGTACAAGCCTTCCTATTGGGGAGACAGGGACAAGGCTAGGAGGGCTTCATGTGAAGATGACATCTGA 2253 0.4061 MSREQQKRGKQEKGSDGAEKVIVAVKASKEIPKTALVWSLSHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASGIKKYPPGTISEQKSDLTDSCSQMILQLHNVYDPNKINVRIKIVSGSPCGAVAAEAKKTQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGPQKKDVEEAGPSPSEQDDMPENRTKIKLDSLNSIKGPTVTPTSSPELGTPFTATEAGTSSVSSSDPGTSPFFISEMNGEFKKEETIKESQELVDTNSDTESESLSTSSASMRYQPWITELLLHQQSSQRNEERSDISHGIPQASTTRAFLEKYSRLDRGAGFEISTYRNDMDFSGNLREAIALSGNAPPGPPPLCSICQHKAPVFGKPPRWFTYSELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDTLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLGKHYSEHEVYCMLHAASLCIQRDPQCRPRMSQVLRILEGDMVMDSNYISTPGYDAGNRSGRLWSEPLQRQQHYSGPLLEESLESFSGKLSLDKYKPSYWGDRDKARRASCEDDI 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00105 750 SUPERFAMILY Protein kinase-like (PK-like) 387 680 IPR011009 -
Gma07g00105 750 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 708 - -
Gma07g00105 750 Gene3D Transferase(Phosphotransferase) domain 1 479 684 - -
Gma07g00105 750 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Gma07g00105 750 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Gma07g00105 750 MobiDBLite consensus disorder prediction 176 248 - -
Gma07g00105 750 PANTHER OS01G0253100 PROTEIN 16 708 IPR045271 GO:0004714|GO:0006468
Gma07g00105 750 CDD USP_Like 20 143 - -
Gma07g00105 750 MobiDBLite consensus disorder prediction 205 248 - -
Gma07g00105 750 Gene3D HUPs 18 170 IPR014729 -
Gma07g00105 750 CDD STKc_IRAK 409 675 - -
Gma07g00105 750 ProSiteProfiles Protein kinase domain profile. 403 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00105 750 MobiDBLite consensus disorder prediction 266 287 - -
Gma07g00105 750 Pfam Protein tyrosine and serine/threonine kinase 407 672 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00105 Gma-Chr7 875174 879608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00105 383 692 Trihelix Transcription Factor Family AT1G70460 52.188 2.11e-103 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma07g00105 PK_Tyr_Ser-Thr 6.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00105 - - gmx:100816340 1500.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00105 07 875174 879608 Gma07g00105 07 875174 879608 ECH
Gma07g00105 07 875174 879608 Gma08g01795 08 15977309 15982709 GST
Gma13g03151 13 45618792 45623014 Gma07g00105 07 875174 879608 PCT
Gma15g00215 15 1895345 1899254 Gma07g00105 07 875174 879608 PCT
Gma07g00105 07 875174 879608 Gma13g03151 13 45618792 45623014 PCT
Gma07g00105 07 875174 879608 Gma15g00215 15 1895345 1899254 PCT