Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00104 ATGGCTTCAAACTCTGCGGCGGAAGGAGTATCAATGGGCGACGATTACGAAGCCTTGATTGCAACCACCGACGCGGAGCTTCTGAAGCGAGCATGGCGCAACGAGAAGGCAGCCCCCGAGATTCTCCGCTACGAATCTGATTTGGTTTCCCGCGTCAAGAAAGTCATTCAATTCCTGGAAGAAACTGTGGAGGAGAAATCCAGTGGCGGTACTAATCCTCTTTCAGTGTCTCTGTATCAGATGGACTTGGATAGAACTCTCTTTCTGTTAAGATCTTATCTCAGGATCCGCATCCAGAAGATTGAAAAGTTCGTGTTCCACATCCAAAAAACTGAAGAactttggaacaggctatctaaagacgagaaagattttgccaaagcGTGTGAAAATGACCTAAAGCAACATCTGGATGAGAGCGTTCTGTTGAAGTTGCCTAAAGATTATAAGTCTGTTCTGAGGCAATCTTCAATGAGTGAAGAGGATGACATGGTCCCAGAACCACAACTAGACACATTTGTTTTGTGTAGAAGTAAAGAGTATCTCACGGGCATTCAGCTCGAAGATGGACCTGTTGATGACAGGCAAATTCTCTTGTCGAAGCTGTTTGAGATGGAGCCTGGTGTCCTCCACTTCATATGTTACAAATCAATATAG 657 0.4216 MASNSAAEGVSMGDDYEALIATTDAELLKRAWRNEKAAPEILRYESDLVSRVKKVIQFLEETVEEKSSGGTNPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKFVFHIQKTEELWNRLSKDEKDFAKACENDLKQHLDESVLLKLPKDYKSVLRQSSMSEEDDMVPEPQLDTFVLCRSKEYLTGIQLEDGPVDDRQILLSKLFEMEPGVLHFICYKSI 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00104 218 PIRSF GINS_Sld5 1 218 IPR008591 GO:0006261
Gma07g00104 218 SUPERFAMILY GINS helical bundle-like 22 153 IPR036224 -
Gma07g00104 218 PANTHER SLD5 PROTEIN 7 218 IPR008591 GO:0006261
Gma07g00104 218 Gene3D - 11 218 - -
Gma07g00104 218 Pfam GINS complex protein 49 123 IPR021151 -
Gma07g00104 218 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 218 IPR031633 -
Gma07g00104 218 CDD GINS_A_Sld5 24 142 IPR038749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00104 Gma-Chr7 868028 870838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00104 1 173 Core DNA Replication Machinery Family AT5G49010 59.538 2.42e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00104 K10735 - gmx:100814216 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00104 07 868028 870838 Gma08g01794 08 15972056 15975585 GST