Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00101 ATGAAAATTTTAACCGTAAGATCAATGGAGGAAACTCCTAAGCTCCTCCATGGAACAATTGAAGCTACTATCTTCAATGCGTCACCTTACTCACCTTTATTTCCCTTCAATTGCATATGTGCAAATGGAAATCCTGCTTATGTGACTATAAAGATAGACAGCCAGAAGTTAGCAAAAACCAGCCAAGAAAGCAACCGTGTGTGGAACCAAACTTTTCAGATTCAATGTGCTCATCCAGCTGATTCATGCATCACCATAACACTGAAAACATCGAGTTCTTCCATATTGGGGAAGTTCCATATTCAGGCTCAGCAGCTACTGAAGAAAGGAGGTTTGATCAATGGTTTCTTCCCTCTCCTCATGGATAATGGAAAACCAAACCCAAAACTTAAATTGAAGTTCCAGTTATGGTTCAAGCCGGCAGAATTAGAACCAAGTTGGGCGAAGATGTTGAGCAATGACTGGGAATTTCAAGGGCTGAGGGAGGCTACCTTCCCACTAAGGTCCAATTGTCAGGTCAAACTTTACCATGATGCTCACCATTCTTCTGCTTTTCAACCTCCATTTGATCTATGTGGAGCTCCAAAAAAGCTATGGGAGGATGTCTATAAAGCCATTGAGGGTGCAAAGTATTTAGTTTATATTGCAGGGTGGTCCTTCAATCCCATGATGGTTCTGGTTAGAGATCCTCTCACAGAAATCCCACGTGCCAGAGGAATAAAGTTAGGTGAACTATTGAAGAAGAAGGCAGAGGAAGGAGTGGCTGTGAGGGTTATGCTTTGGGATGATGAAACATCTTTACCCTTTGTTATGAACAAAGGTGAGCTGAACAACCAAGATGAGGAAGCTTTTGCTTATTTCAACCACACAAAAGTAATATGCAGAAAGTGTCCCAGGTCACACCATATGTTCCCCACACTCTTTGCTCACCATCAGAAGACTATAACAGTGGACACCAAAGCACCCAAATCTGTCGGTGACAGAGAACTTATGAGCTTTCTGGGTGGATTAGATCTGTGTGATGGAAGATATGACTCAGAGCAACATTCATTGTTTCAAACACTCATTAGGGAATCTCATTGTTATGACTTCTACCAAACAAGCATTGAAGGAGCTAGCCTCAACAAAGGAGGGCCAAGAAAACCTTGGCATGATGCTCATGCTTGTGTTACTGGTGAGGCTGCTTGGGATGTGTTAACCAATTTTGAGCAAAGATGGACAAAGCAATGTGATCCTTCTTTTCTAGTCCCTTCTAGCACCTTAGCAAATCTTATGCCTAGGACAAGCTCAAGCACTCCTACGGAGAGGAATTGGAAAGTTCAAGTATACAGGTCAATTGACCATGTCTCAGTTGGTGAGTTGTCTACAAAGTTAAATGTGGAGAGGAGCATCCATGAGGCTTATGTTGAAGCAATTAGGCGTGCTGAAAGGTTTATTTACATTGAAAACCAATGTTTCATTGGGGGGTGCCATTGGTGGAAGAAAGATAGGCACAGTGGCTGCACTAATCTAATTCCAATTGAAATTGCACTAAAGGTGGTAAGTAAGATTAAGGCAAAGGAGAGATTTTCCGTGTACATAGTCATACCAATGTGGCCAGAAGGAGAGCCTGAAAGTGAACCTGTTCAAGATATACTGCATTGGACCCGAGAAACAATGGCAATGATGTATAGGTTGATTGGAGACGCAATACAAGAAAGTGGAGAACCAGCACACCCTAGAGACTACTTGAATTTCTTCTGTCTTGCAAATAGGGAGCAGAAGGGACAAGGGGAGTATCTTCCACTAGATTCTCCCCAACCTGAAACTCAATACTGGAATGCTCAAAAAAATAGGAGATTCATGGTTTATGTTCACTCCAACTTCATGATAGTGGACGACCTGTACATATTGATAGGATCAGCTAATGTAAACCAAAGATCCATGGACGGGCAAAGGGACACTGAGATAGCCATTGGATGCTACCAGTCTCAAGATGGAGATGATAACAACCAAATGAACCTAGATGATATTCAAGCATATAGAATGTCTCTATGGTATGAGCACACTGTTAGTGTTGATGAGTTGTTCTTAGAGCCAGAAAGATTGGAATGTGTGGAGAGAATGCGCTCAATAGGAGATGAAATGTGGGAAATCTACAGCAGTGAAGAAATTGTGGACATGGAAGGTGTGCACCTTGTAACTTACCCTGTGAGAGTAACACAAGAAGGGTATGTGAAAGACCTCACTGATGGAGTTCACTTTCCTGATACAAATTCTTTAGTGAAAGGGAAAAGGTCTAAAATATTGCCCCCTATCTTTACCACTTAG 2310 0.4199 MKILTVRSMEETPKLLHGTIEATIFNASPYSPLFPFNCICANGNPAYVTIKIDSQKLAKTSQESNRVWNQTFQIQCAHPADSCITITLKTSSSSILGKFHIQAQQLLKKGGLINGFFPLLMDNGKPNPKLKLKFQLWFKPAELEPSWAKMLSNDWEFQGLREATFPLRSNCQVKLYHDAHHSSAFQPPFDLCGAPKKLWEDVYKAIEGAKYLVYIAGWSFNPMMVLVRDPLTEIPRARGIKLGELLKKKAEEGVAVRVMLWDDETSLPFVMNKGELNNQDEEAFAYFNHTKVICRKCPRSHHMFPTLFAHHQKTITVDTKAPKSVGDRELMSFLGGLDLCDGRYDSEQHSLFQTLIRESHCYDFYQTSIEGASLNKGGPRKPWHDAHACVTGEAAWDVLTNFEQRWTKQCDPSFLVPSSTLANLMPRTSSSTPTERNWKVQVYRSIDHVSVGELSTKLNVERSIHEAYVEAIRRAERFIYIENQCFIGGCHWWKKDRHSGCTNLIPIEIALKVVSKIKAKERFSVYIVIPMWPEGEPESEPVQDILHWTRETMAMMYRLIGDAIQESGEPAHPRDYLNFFCLANREQKGQGEYLPLDSPQPETQYWNAQKNRRFMVYVHSNFMIVDDLYILIGSANVNQRSMDGQRDTEIAIGCYQSQDGDDNNQMNLDDIQAYRMSLWYEHTVSVDELFLEPERLECVERMRSIGDEMWEIYSSEEIVDMEGVHLVTYPVRVTQEGYVKDLTDGVHFPDTNSLVKGKRSKILPPIFTT 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00101 769 SUPERFAMILY Phospholipase D/nuclease 433 697 - -
Gma07g00101 769 Pfam C2 domain 46 119 IPR000008 -
Gma07g00101 769 Gene3D C2 domain 38 139 IPR035892 -
Gma07g00101 769 PANTHER PHOSPHOLIPASE D ALPHA 9 769 - -
Gma07g00101 769 PIRSF PLD_plant 7 769 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Gma07g00101 769 Pfam Phospholipase D Active site motif 307 343 IPR001736 GO:0003824
Gma07g00101 769 Gene3D Endonuclease Chain A 453 668 - -
Gma07g00101 769 PANTHER PHOSPHOLIPASE D 9 769 IPR015679 -
Gma07g00101 769 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 306 343 IPR001736 GO:0003824
Gma07g00101 769 Pfam Phospholipase D C terminal 687 758 IPR024632 -
Gma07g00101 769 SUPERFAMILY Phospholipase D/nuclease 164 415 - -
Gma07g00101 769 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 614 641 IPR001736 GO:0003824
Gma07g00101 769 Gene3D Endonuclease Chain A 184 437 - -
Gma07g00101 769 SMART pld_4 306 343 IPR001736 GO:0003824
Gma07g00101 769 SMART pld_4 614 641 IPR001736 GO:0003824
Gma07g00101 769 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 136 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00101 Gma-Chr7 849709 853292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00101 38 769 Phospholipase D Gene Family (Wang group) AT1G55180 62.046 0.0 951
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00101 K01115 - gmx:100789235 1572.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00101 07 849709 853292 Gma07g00101 07 849709 853292 ECH
Gma07g00101 07 849709 853292 Gma08g01791 08 15955460 15959026 GST
Gma15g00218 15 1917041 1920167 Gma07g00101 07 849709 853292 PCT
Gma07g00101 07 849709 853292 Gma15g00218 15 1917041 1920167 PCT