Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00087 ATGCAGCCGAAATCTCACACCCCTTTTTTTGTTCCTCCCCAAAAAGCCATGAACAACAATAACCCTAACAACAACAACACCAATAACAGAATCTCAACACCAAGAAATGGCAACAGCGCCACCCAGGCCTGTGCTGCATGCAAGTACCAACGCAGAAAGTGTGCACCTGATTGCATCCTTGCACCTTACTTCCCCCATGATCGCCAGCGCCAGTTCCTCAACGCGCACAAGTTGTTCGGCGTGAGCAACATCACCAAGATCATCAAGCTTCTCAGCCCTCAGGACAAGGACCAAGCCATGCGCACCATCATCTATCAATCCGACATGCGCGCTACAGACCCAGTTGGTGGTTGCTACAGGTACATTCTCGAACTCCAGGCCCAAATCGAGTACTATAGGGCGGAACTCGAACTCGTCCTTCAACAACTCGCCATCTTCAGAGCCCAGGCTCAGCACCAACACCAACAACAACATGGTATCTTTGCTGCAAACAACGTTAATGTAGCTGTCAATGGTGATGGTGAGGTTTTGAACGGTGATCCAATGGGCTTGTATAACCAGCAACAACACTATCAGTGTCTGCAGGCACAACAGGAGGAGGAGCAGTATGTTATGATGCACGAAAATGGTAATGGAAGCCAAAACATCGATGGCATTGCTTTGCAGGAGCAAATTAAAACGTGGGCTGTGCAGAACACTGCTGTGTCGCTTTCTTCGTTGTCATTGCATGGGCAGAATAGTAATGTCAGCGATGAGTATGATCACAAGCCGGTGGTGGGGATTGACATGGATTCTGATGAGAGAAGCGAGTTAGGGTTCGAGTCTGAAGAATTAGTCCATCGCAGTGATGAAGCAGTTTTGTTTAAGATAGACGATGCAGTAATAAAAGCGGAGGCTAATCCCTGCATGCAACAAGCTCAAGACCATGACCTGAAAGGTGCAGCAACATCGTTTACTCTCACAAATTGTAGTTGCTGA 978 0.4796 MQPKSHTPFFVPPQKAMNNNNPNNNNTNNRISTPRNGNSATQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKLLSPQDKDQAMRTIIYQSDMRATDPVGGCYRYILELQAQIEYYRAELELVLQQLAIFRAQAQHQHQQQHGIFAANNVNVAVNGDGEVLNGDPMGLYNQQQHYQCLQAQQEEEQYVMMHENGNGSQNIDGIALQEQIKTWAVQNTAVSLSSLSLHGQNSNVSDEYDHKPVVGIDMDSDERSELGFESEELVHRSDEAVLFKIDDAVIKAEANPCMQQAQDHDLKGAATSFTLTNCSC 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00087 325 Pfam Lateral organ boundaries (LOB) domain 43 138 IPR004883 -
Gma07g00087 325 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 37 259 - -
Gma07g00087 325 Coils Coil 122 142 - -
Gma07g00087 325 MobiDBLite consensus disorder prediction 1 37 - -
Gma07g00087 325 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 37 259 - -
Gma07g00087 325 ProSiteProfiles LOB domain profile. 42 143 IPR004883 -
Gma07g00087 325 MobiDBLite consensus disorder prediction 12 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00087 Gma-Chr7 719931 721979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00087 42 158 AS2 family AT3G13850 76.271 2.40e-59 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma07g00087 LOB 4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00087 - - gmx:100786728 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00087 07 719931 721979 Gma08g01778 08 15812287 15813437 GST
Gma13g03135 13 45509148 45509798 Gma07g00087 07 719931 721979 PCT
Gma07g00087 07 719931 721979 Gma13g03135 13 45509148 45509798 PCT