Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00071 ATGACGCGGGGGAGGATAAGGGCAAAGCTCCGGAGGAGCCATCTTTACACATTTGGTTGCCTTAAGCCTTCTACCACTGAGGAGGCACCTCATCCACTTCAAGGTCCCGGGTTCTCGCGAACTGTGTATTGCAACCAGCCTCTACTCCATGATAAGAGGCCTCTATTGTACTGCAAAAATGATATATCCACGACCAAGTACAATGTTATTACCTTTTTCCCCAAGGCACTCTTTGAACAATTTCGTAGGGTTGCTAATATATACTTCCTTTTGGCTGCATGTCTGTCAGCCTCTCCCATTTCACCTTTCAGCCCACTGAGCATGATTGCCCCTTTGGCATTTGTTGTGGGGCTTAGTATGGCGAAGGAAGCATTGGAAGATTCACGCAGGTTTGTTCAGGATGTCAAAGTTAATCGCCGCAAGGTTAATCGCCATAAAGGCGATGGTATTTTTGGTCCCAGGTCGTGGCAGAACATTATGGTTGGGGATGTGGTAAAAGTGAATAAGGATCAATTTTTTCCAGCTGATTTGCTTCTCCTGTcatcgagttacgaggatgggatttgctatgtggagactatgaatttagatggtgagaccaacttgaaggtgaaaAGATCATTGGAGGCCACCATGACTCTAGATAATGATGAAGTTTTTAAAGATTTCACTGGAACAATACAATGTGAAGACCCAAACCCCAATCTTTATACGTTTGTCGGAAACTTAGATTATGAGTGCCAGATTTATCCTCTTGATCCTAGTCAAATTCTTCTCCGAGATTCTAAGCTCAGGAACACTGATTACATCTATGGGGTGGCCATTTTCACTGGTCATGACAGCAAAGTCATGCAGAATTCCACAAAATCCCCTTCAAAAAGAAGCACAATAGAAAAGAAGATGGATTATATCATATACACCCTCTTCACTGTCCTTATTTTGATATCTGTTATTAGTTCCATAGGATTTATCTTCAAGACAAAGTACCAAGCCCCAAAGTGGTGGTACTTACGGCCCGACAATATTGAATATCAGTATGATCCCAACAAGGTTGGAGTGGCTGGAATGAGTCATCTGATTACTGCACTTATTCTTTATGGATATTTGATACCCATCTCACTTTATGTTTCCATTGAGGTTGTAAAGGTTTTACAGGCAACCTTCATCAACCAAGACATTCAAATGTATGATGAAGAAACTGGGACTCCAGCCGATGCGCGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGATACTATCTTGTCAGATAAAACTGGAACTTTGACCTGTAACCAGATGGACTTTTTGAAGTGCTCCATTGCCGGTACTGCATATGGCGTGCGCTCCAGTGAAATTGAAGTTGCTGCAGCAAAGCAGATGGCTTCTGATCACGAGGACCAGGAGTCAGATCTCTCGAATTTCCCCATGCCTAAGAGTAAAGCGCGCATTTCATGGGATAATGTTAGAAAAGCTGAAGAAATTGAACTGGAGACTGTTGTTACTTCCAAAGGAGATGAggatcaaaagcatgccataaaaggatttggttttgaagatgaccgcctcatgaattgtaattggttgcaagagcctaatgcagatgaccttttgatgttctttcgaatattagcagtttgccacactgccattcctgagctgaatgaggagactggcgtttatacatatgaagctgagtcacctgatgaaggggcttttcttgtagcagcaagagaatttggctttgagttttgcagaaggaCTCAGTCTAGTATTTTCATACATGAAAGATTTTCTGCTTCTAGGAAAGTGGTTGAAAGAGAGtacaaacttttgaatctgctggatttcactagcaaaagaaagcgtatgtcagtgattgtgcgtgatgaggagggcagtctttttcttttttgcaaaggggctgacagTATCATATTTGATCGATTGTCAAAGAATGGAAAACATTATTTGGAGGCTACTACCAGACATCTAAATGAATATGGAGAAGCTGGTTTGAGAACACTAGCCCTGGCTTATAGAAAGCTTGATGAGCAAGAATACACTGCTTGGAACAATGAATTTCAGAAAGCCAAAGCTGCTGTTGGGGCTGACAGAGATTCAATGCTTGAGCGGGTATCAGATATGATGGAGAAAGGGTTGATTCTTGTTGGGGCTACAGCTGTGGAAGACAAACTGCAGAAAGGGGTTCCCCAATGTATTGATAATCTTGCTCAAGCTGGTCTCAAGATCTGGGTGTTGACAGGGGATAAGATGGAAACTGCAATCAACATTGGATTTGCTTGCAGTTTACTTCGACAGGGTATGAAGCAGATCTGTATAACTACTCCTGTTTCAGATTCTGTAGCCACTGATGTTAAACAGGGCATCAAGGACAACATTTTAAATCAAATCACCAACGGTTCCCAAATGATAAAACTGGAGAAGGATCCTCATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTGACATATGCTCTAGAAGATGATATGAAGCTCCTATTTTTGGGATTGGCTGTTGATTGTGCATCTGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCATTGgtaaccaggttagtgaaacaaggttctgggaagactactctagcaataggtgatggtgcaaatgatgttggcatgattcaagaagcagatattggtgttggaatcagtggggttgaaggtatgcagGCAGTGATGGCTAGTGACTTTGCAATTGCCCAATTTCGATATTTGGAGAGGCTCCTGGTAGTCCATGGACATTGGTGTTACAAGAGAATTGCACAAATGatatgttatttcttctacaagaatattacatttggcctcactatcttctattttgaggccttcacaggcttctctggtcaatcggtttatgatgactggtacatgattttgttcaatgttgttctgacatcattacccgtcatttcactcggtgtttttgagcaagatgttccatcagaagtttgtttacagTTTCCTGCACTTTATCAACAAGGACCCAAGAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGCAATGGTCTCTATTCCTCCCTCATCATCTTCTTGCTCATCGTCACCATCTTCTACGACCAAGCATTCCGTGCAGATGGCCAGGTAGCTGACATGGCTGCTGTTGGGACCACTATGTTCACTTGCATCATCTGGACTGTCAACTGTCAGATTGCGCTTACGATGAGCCACTTTACATGGATTCAGCACCTGTTTGTATGGGGTAGCATAGCCACTTGGTACGTCTTTCTCTCCTTGTATGGAATGCTTTCTCCAGAATATTCCAGGAGTGCCTACCAAATACTGGTTGAATCTCTTGGTCCTGCGCCCATTTACTGGGTAACAACCCTTTTAGTTACAGTTACATGCAATCTTCCTTATTTTGCCCACATATCCTTCCAAAGATGTTTCAATCCCATGGACCATCACATTATCCAAGAAATCAAGTACTACAAAAAGGATATTGAAGATCAACACATGTGGACAAGGGAGCGTTCTAAGGCCAGACAGGAAACCAAGATTGGGTTCACTGCAAGAGTGGAAGCAAAGATCAGGCAACTTAAGGGAAGATTGCAGAAGAAGCAATCTACCTTGGCTATTTCGGCCCCATCGTGA 3675 0.3418 MTRGRIRAKLRRSHLYTFGCLKPSTTEEAPHPLQGPGFSRTVYCNQPLLHDKRPLLYCKNDISTTKYNVITFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFVQDVKVNRRKVNRHKGDGIFGPRSWQNIMVGDVVKVNKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEATMTLDNDEVFKDFTGTIQCEDPNPNLYTFVGNLDYECQIYPLDPSQILLRDSKLRNTDYIYGVAIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISVISSIGFIFKTKYQAPKWWYLRPDNIEYQYDPNKVGVAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEIEVAAAKQMASDHEDQESDLSNFPMPKSKARISWDNVRKAEEIELETVVTSKGDEDQKHAIKGFGFEDDRLMNCNWLQEPNADDLLMFFRILAVCHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCRRTQSSIFIHERFSASRKVVEREYKLLNLLDFTSKRKRMSVIVRDEEGSLFLFCKGADSIIFDRLSKNGKHYLEATTRHLNEYGEAGLRTLALAYRKLDEQEYTAWNNEFQKAKAAVGADRDSMLERVSDMMEKGLILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTPVSDSVATDVKQGIKDNILNQITNGSQMIKLEKDPHAAFALIIDGKTLTYALEDDMKLLFLGLAVDCASVICCRVSPKQKALVTRLVKQGSGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRYLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLIIFLLIVTIFYDQAFRADGQVADMAAVGTTMFTCIIWTVNCQIALTMSHFTWIQHLFVWGSIATWYVFLSLYGMLSPEYSRSAYQILVESLGPAPIYWVTTLLVTVTCNLPYFAHISFQRCFNPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFTARVEAKIRQLKGRLQKKQSTLAISAPS 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00071 1224 SUPERFAMILY HAD-like 417 936 IPR036412 -
Gma07g00071 1224 Pfam Cation transport ATPase (P-type) 546 651 - -
Gma07g00071 1224 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Gma07g00071 1224 SUPERFAMILY Calcium ATPase, transmembrane domain M 52 1156 IPR023298 -
Gma07g00071 1224 Gene3D - 114 288 - -
Gma07g00071 1224 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 687 IPR023299 GO:0000166
Gma07g00071 1224 Gene3D - 432 461 IPR023299 GO:0000166
Gma07g00071 1224 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1222 - -
Gma07g00071 1224 CDD P-type_ATPase_APLT_Dnf-like 60 1040 - -
Gma07g00071 1224 Gene3D - 720 921 IPR023214 -
Gma07g00071 1224 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1167 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gma07g00071 1224 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1159 IPR032630 -
Gma07g00071 1224 SFLD Haloacid Dehalogenase 405 932 - -
Gma07g00071 1224 Coils Coil 1197 1217 - -
Gma07g00071 1224 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Gma07g00071 1224 SUPERFAMILY Calcium ATPase, transduction domain A 147 286 IPR008250 -
Gma07g00071 1224 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 853 962 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00071 1224 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Gma07g00071 1224 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Gma07g00071 1224 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1222 - -
Gma07g00071 1224 Gene3D - 592 703 IPR023299 GO:0000166
Gma07g00071 1224 SFLD p-type atpase 405 932 IPR044492 -
Gma07g00071 1224 Gene3D - 419 431 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00071 Gma-Chr7 574254 579663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00071 1 1219 Primary Pumps ATPases AT1G17500 75.164 0.0 1938
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00071 K01530 - gmx:100784621 2433.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00071 07 574254 579663 Gma08g01754 08 15611710 15617478 GST
Gma13g03119 13 45373391 45379705 Gma07g00071 07 574254 579663 PCT
Gma15g00246 15 2144261 2150053 Gma07g00071 07 574254 579663 PCT
Gma07g00071 07 574254 579663 Gma13g03119 13 45373391 45379705 PCT
Gma07g00071 07 574254 579663 Gma15g00246 15 2144261 2150053 PCT