Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00070 ATGGAACCTCGAGTTGGGAACAAGTTCCGCCTCGGTCGGAAAATCGGTAGCGGATCTTTCGGGGAGATCTATCTCGGAACTAATATTCAGACAAATGAAGAGGTTGCGGTTAAGCTTGAAAGTGTCAAAACCAAGCATCCTCAATTGTTGTACGAATCAAAGCTGTATAAAATACTGCAAGGAGGAAATGGGATTCCAAATGTGAAATGGTATGGTGTTGAAGGAGAGTACAATGTGCTCGTGATGGATTTACTTGGCCCTAGCCTTGAGGATTTATTCAACTTCTGTAGTCGGAAATTGTCTCTCAAAACTGTTCTTATGCTTGCTGATCAGATGCTAAATCGAGTTGAATTTGTTCATTCCAAATCATTTTTACATCGCGACATCAAGCCAGACAACTTCCTCATGGGTTTAGGGAGGCGTGCGAATCAAGTGTATATCATTGACTTTGGCCTTGCTAAGAAATATAGAGACACCACTACACATCAGCATATTCCTTACAGAGAGAACAAGAATTTGACTGGAACTGCTAGGTATGCTAGTATGCATACTCATCTAGGAATTGAGCAAAGCCGTAGGGATGATTTAGAATCACTTGGATATGTTCTTATGTACTTTTTAAGAGGAAGTCTACCTTGGCAGGGATTGAAAGCTGGTACTAAGAAGCAGAAGTATGAGAAGATTAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTCTGTCGTGGCTATCCCTCAGAATTTGCTTCATACTTCCATTACTGCCGGTCACTGAGGTTTGATGATAAACCAGATTATGCTTATTTGAAAAGACTTCTACGTGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTTCAAGTGCCACTGCCCCTGCCCGTGCTATTGGTCCGGCCGCTGGACCAAGTTCAGGTGTGCCACCACTGGTTGCAAATGGTGATGGACAGTTAGTTGTCAAGTTCTAA 1002 0.4172 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAVKLESVKTKHPQLLYESKLYKILQGGNGIPNVKWYGVEGEYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMLNRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTTTHQHIPYRENKNLTGTARYASMHTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLLRDLFIREGFQFDYVFDWTILKYQQSSSATAPARAIGPAAGPSSGVPPLVANGDGQLVVKF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00070 333 PANTHER CASEIN KINASE-RELATED 1 305 - -
Gma07g00070 333 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Gma07g00070 333 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Gma07g00070 333 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00070 333 Gene3D Transferase(Phosphotransferase) domain 1 1 309 - -
Gma07g00070 333 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 305 IPR030509 GO:0004672|GO:0005524
Gma07g00070 333 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Gma07g00070 333 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00070 333 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00070 333 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00070 Gma-Chr7 569156 573224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00070 11 212 Receptor kinase-like Gene Family AT1G67720 28.095 5.42e-13 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Gma07g00070 Pkinase 9.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00070 K02218 - gmx:100787808 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00070 07 569156 573224 Gma08g01753 08 15606903 15611114 GST
Gma13g03118 13 45365709 45371153 Gma07g00070 07 569156 573224 PCT
Gma15g00247 15 2152812 2157742 Gma07g00070 07 569156 573224 PCT