Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00066 ATGGGGAATCAGAAGCAGAAGTGGACGCAGGACGAAGAAGACGCTCTCATAGCCGGCGTTGAAAAGCACGGCCCCGGAAAGTGGAAGAACATTCTCAAGGATCCCCAATTCGCCCCTTTTCTCACTTCCCGTTCCAACATCGACCTCAAGGATAAATGGCGCAATTTGAGCGTCAGCAACGGTGCTCAAGGCTCCAAAGAAAAATCTAGGGTTCCCAAGCCTAAAGCCTTCTCTGCTCCTCCTGCTACTACCGCCACCACCGCCACTCCTCAGAACGCTTCTCCTGCTCCTCAAAGCGCATCGTCTGATGCTGCTGTTGCCCCTGACGCTTCTCAGAATGACCAAGATGCCAAAAACCCTCCAAGGTATAATGCATTGATTTTTGAAGCTCTATCAGCACTGAAAGATAGTAATGGATCCGACATGAATGCCATTATTAAATTCATGGAGGTACCAAATGGTTACAAGGTGAAAAAGGAAGCCTCCTCGGGGACAAAGTCACCTTCACCAAAAGCAAAGGATGTCCGGCCTCCACAACCACAACGGCAATCTCCAGCTTCTCTCTTTATGACTAATGACACATTAAAGGAAGCTGCGGATACTGCAGCCTACAGAGTTGCTGATGCTGAAAGTAAATCATATCTGGCTGCAGAAGCAGTAAAGGAGGCAGAAAAAATATCATTGCTGGTTGAACATAGTGATTCAATGTTACAGCTAGCAAAAGATATATATGAACAATGTTCCCGTGGTGAAATTATCCTCTTGGCTTAA 771 0.4682 MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSNGAQGSKEKSRVPKPKAFSAPPATTATTATPQNASPAPQSASSDAAVAPDASQNDQDAKNPPRYNALIFEALSALKDSNGSDMNAIIKFMEVPNGYKVKKEASSGTKSPSPKAKDVRPPQPQRQSPASLFMTNDTLKEAADTAAYRVADAESKSYLAAEAVKEAEKISLLVEHSDSMLQLAKDIYEQCSRGEIILLA 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00066 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 62 IPR017930 -
Gma07g00066 256 MobiDBLite consensus disorder prediction 158 190 - -
Gma07g00066 256 PANTHER TELOMERE REPEAT-BINDING FACTOR 4-RELATED 151 255 - -
Gma07g00066 256 PANTHER TELOMERE REPEAT-BINDING FACTOR 4-RELATED 1 150 - -
Gma07g00066 256 SUPERFAMILY "Winged helix" DNA-binding domain 118 154 IPR036390 -
Gma07g00066 256 MobiDBLite consensus disorder prediction 80 119 - -
Gma07g00066 256 Gene3D - 8 80 - -
Gma07g00066 256 Gene3D - 115 172 IPR036388 -
Gma07g00066 256 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Gma07g00066 256 SUPERFAMILY Homeodomain-like 2 58 IPR009057 -
Gma07g00066 256 PANTHER SINGLE MYB HISTONE 4 151 255 IPR044597 GO:0003691
Gma07g00066 256 PANTHER SINGLE MYB HISTONE 4 1 150 IPR044597 GO:0003691
Gma07g00066 256 MobiDBLite consensus disorder prediction 58 121 - -
Gma07g00066 256 SMART sant 4 59 IPR001005 -
Gma07g00066 256 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Gma07g00066 256 CDD SANT_TRF 6 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00066 Gma-Chr7 544773 549628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00066 1 255 Single Myb Histone (SMH) Gene Family AT1G17520 42.759 3.99e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma07g00066 Myb_DNA-binding 1.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00066 K09422 - gmx:780537 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00066 07 544773 549628 Gma08g01749 08 15579103 15584708 GST