Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00058 ATGGGTGTGAACTCTTACTCCAACAGCATGAAGATCCAAGCCGAGATACAAATGCCACCCTTAGAAATCCACAAGGTTCGTTTGCCACCAGAACGCACCACCTTGCAGAAACTCAGACACAGACTCTCTGAGATCTTCTTCCCAGATGATCCACTCCACAGGTTCAAGAACCAAACATGCCTCATCAAGCTCCTCCTTGCACTTCAATACTTTTTCCCCATTTTCCAATGGGCCCCTCTCTACAACCTTTCCCTTCTCCGCTCTGACATCATCTCTGGTCTCACCATCGCTAGCCTCGCCATTCCTCAGGCTGACTATGCTAAGCTTGCAAACTTGCCACCTATTCTTGGATTATATTCCAGTTTTGTGCCCCCGTTGATATATTCCCTGCTTGGAAGTTCTAGACATCTTGGTGTTGGTCCAGTTTCAATTGCATCTTTGGTCATGGGATCAATGTTAAGCGAGACCGTTTCTTATAGTCAAGATCCAATTCTCTATCTTAAAATGGCCTTCACTGCCACTTTCTTTGCCGGTTTGTTCCAATCTTCTCTGGGTATATTAAGGTTAGGCTTTGTAATTGATTTTCTCTCAAAGGCAACACTGGTGGGTTTTATGGCTGGTGCAGCGATTATTGTGTCACTGCAACAGCTGAAAGGGTTGCTTGGAATAGTTCATTTCACCAACAAGATGCAAATAACACCTGTACTGATTTCTGTTTTCAAGCAAAGAGACGAGTGGTCATGGCAAAACCTTTTGTTGGGATTCAGTTTCCTACTATTCCTGTTGACAACAAGGCACATTAGCCTGAAGAAGCCAAAATTATTCTGGGTTTCAGCAGCTGCCCCATTGACATCAGTTATTCTGTCAACCATTTTCGTATTTATTCTGAGAAATAAGACACATAAAATTGCTATTATTGGTGGATTGCCAAAGGGACTTAATCCACCATCATCAAACATGTTATACTTCAATGGTCCTTATTTGGCTCTTGCTATTAAAACAGGACTTGTCACTGGGATCTTGTCTCTGACTGAAGGAATCGCAGTAGGAAGAACATTTGCTGCACTTAAGAATTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATAGCTGGCTCTTGTTCTTCATGCTATGTCACAACAGGATCCTTTTCTCGATCAGCTGTTAACTACAATGCCGGGGCACAGACTGCGGTCTCAAATATAATCATGGCATCAGCAGTTCTTGTGACCCTTTTGTTTCTGATGCCACTGTTCTATTACACACCGAATGTAGTCTTAGCAGCCATTATCATCACTGCTGTTTCAGGGCTAATAGATTATCAAGCTGCATATAAATTGTGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCTTGTGCTCCTTTTTCGGTGTTCTGTTCATTTCAGTGCCTTTAGGCCTTGGAATAGCGGTGGCAATATCAGTCTTCAAGATCTTGCTTCATGTCTCTAGGCCAAACACACTGGTTTTGGGGAATATACCAGGGACGCCAATATTCCACAACCTAAACCAATATAGAGAAGCTTTGAGGATCCCTTCATTTATCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACGTACCTACAAGAAAGGATACTGAGATGGGTTCGAGAAGAGGAAGAGCGAGTAAAAGCAAACAATGAGAGTACTTTGAAGTGCATAATTTTGGACATGACAGCTGTTACTGCCATAGACACAAGTGGAATTGATACTCTATGTGAACTCAGAAAGGTGCTGGAAAAAAGATCACTTCAGCTTGTGTTGACAAATCCTGTTGGAAATGTGATGGAAAAGTTGCATCAGTCAAATATTTTGGATTCCTTTGGGTTGAAAGGAGTCTATCTCTCAGTAGGAGAAGCTGTGGCTGACATTTCATCTTCTTGGAAAGCTCAGCCTTGA 1944 0.4244 MGVNSYSNSMKIQAEIQMPPLEIHKVRLPPERTTLQKLRHRLSEIFFPDDPLHRFKNQTCLIKLLLALQYFFPIFQWAPLYNLSLLRSDIISGLTIASLAIPQADYAKLANLPPILGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSYSQDPILYLKMAFTATFFAGLFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQITPVLISVFKQRDEWSWQNLLLGFSFLLFLLTTRHISLKKPKLFWVSAAAPLTSVILSTIFVFILRNKTHKIAIIGGLPKGLNPPSSNMLYFNGPYLALAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVSGLIDYQAAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVAISVFKILLHVSRPNTLVLGNIPGTPIFHNLNQYREALRIPSFIILAVESPIYFANSTYLQERILRWVREEEERVKANNESTLKCIILDMTAVTAIDTSGIDTLCELRKVLEKRSLQLVLTNPVGNVMEKLHQSNILDSFGLKGVYLSVGEAVADISSSWKAQP 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00058 647 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
Gma07g00058 647 Gene3D STAS domain 496 641 IPR036513 -
Gma07g00058 647 SUPERFAMILY SpoIIaa-like 521 638 IPR036513 -
Gma07g00058 647 Pfam STAS domain 517 635 IPR002645 -
Gma07g00058 647 CDD STAS_SulP_like_sulfate_transporter 517 632 - -
Gma07g00058 647 Pfam Sulfate permease family 86 464 IPR011547 GO:0016021
Gma07g00058 647 TIGRFAM sulP: sulfate permease 73 635 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma07g00058 647 PANTHER SULFATE TRANSPORTER 11 647 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma07g00058 647 ProSiteProfiles STAS domain profile. 516 639 IPR002645 -
Gma07g00058 647 PANTHER SLC26A/SULP TRANSPORTER-RELATED 11 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00058 Gma-Chr7 467313 471386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00058 21 647 Inorganic Solute Cotransporters AT3G15990 76.032 0.0 1003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00058 K17471 - gmx:100780331 1243.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00058 07 467313 471386 Gma08g01896 08 17023808 17027750 GST
Gma13g03219 13 46258547 46263695 Gma07g00058 07 467313 471386 PCT
Gma15g00135 15 1151275 1156648 Gma07g00058 07 467313 471386 PCT
Gma07g00058 07 467313 471386 Gma13g03219 13 46258547 46263695 PCT
Gma07g00058 07 467313 471386 Gma15g00135 15 1151275 1156648 PCT