Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00056 ATGAGCGTGGTTGGTTTCGATTTCGGTAACGAGAGTTGCGTTGTTGCGGTTGCGAGGCAGAGAGGGATTGACGTTGTGCTCAATGATGAGTCCAAGCGTGAAACGCCCGCCATTGTGTGCTTCGGTGACAAGCAACGCTTCATTGGCACTGCCGGTGCTGCCTCCACTATGATGAACCCTAAGAATTCAATCTCACAGATTAAGAGACTCATTGGTAGGAAATTCGCTGATCCCGAATTGCAGCGGGATCTTAAGTCATTGCCGTTTCTCGTCACTGAGGGGAGTGATGGGTACCCGTTGATTCATGCGCGATACATGGGTGAGGCCAAGACATTTACGCCTACCCAAGTGTTTGGAATGATGCTGTCGAATCTTAAGGAAATTGCGGAGAAGAATCTCACTACGGCAGTTGTTGATTGTTGCATTGGAATCCCGGTTTATTTCACTGATCTGCAGAGAAGGGCGGTGTTGGATGCGGCCACAATTGCTGGTCTGCACCCGCTTCGGTTGATTCACGAAATGACTGCCACTGCCTTGGCCTATGGGATTTATAAAACGGACCTTCCGGAAAATGATCAGCTGAATGTTGCGTTTGTTGATGTTGGACATGCTAGCTTGCAAGTATGCATTGCTGGATTCAAGAAGGGGCAGCTGAAAGTGTTGGCTCATTCGTATGATAGGTCTTTCGGCGGTAGGGATTTTGATGAGGTTTTGTTCCATCACTTTGCTGAGAAGTTTAAGGACGAGTACAAGATTGATGTTTTTCAAAATGCCAGGGCTTGCATAAGGCTCAGGGCTGCCTGTGAGAAGATCAAGAAGATGCTTAGTGCAAATCCTGAGGCACCTCTCAACATTGAGTGCTTGATGGATGAGAAGGATGTCCGGGGCTTCATCAAGCGAGATGAATTTGAGCAACTAAGTCTTCCAATTTTGGAACGTGTGAAGGGGCCTCTGGAGAAGGCACTTGCTGAAGCAGGTCTTACCGTCGAAAATGTGCACACGGTTGAGGTGGTTGGTTCAGGTTCTCGTGTGCCGGCCATTAACAAAATATTGACAGAGTTTTTCAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCTAGGGGATGTGCGTTGGAATGTGCAATTCTTAGTCCAACGTTCAAAGTACGAGAATTTCAGGTCAACGAAAGCCTTCCTTTCTCGATTTCTCTTTCATGGAAAAGTTCTGGTCCAGATGCACAGGACAATGGACCAGAAAATCAGCAGAGTTCCCTTGTTTTTCCCAAGGGTAATCCCATACCAAGTATCAAGGCACTGACATTCTACAGGTCAGGAACATTCTCTGTTGATGTACAATTTGGTGATGTGAGTGGGCTGCAAACACCTGCTAAGATCAGCACCTATACTATTGGTCCTTTCCAAACTACAAATGGTGAAAAGGCAAAAGTTAAAGTGAAAGTTCGTCTGAATCTGCATGGAATTGTATCCCTTGAGTCTGCAACGCTCCTGGAAGAGGAAGAAGTTGATGTTCCAGTTAGCAAAGAAGCAGCAGGGGAAAATACTAAGATGGACATCGATGAAGTCCCAGCTGAGGCCGCTGCACCTCCTTCCTCCAATGACACTGGTGCTAATATGGAAAATGGAAAGGCTAGTATTGATGCCTCTGGGGTTGAAGATGGCATCCCTGAGAGTGGAGGTAAGCCTTTGCAAACAGATACTGATACCAAGGTTCAGGCTCCAAAGAAAAAGGTTAAGAAAACAAACATTCCTGTAGTAGAGTTAATTTATGGAGCAATGGTGCCTGTGGATGTCCAGAAAGCACTAGTGAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACAAAAGACAAGAAAAACGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCACTGCTTCAGAGAGAGATGATTTTACTGCTAAACTTCAGGAAGTGGAAGATTGGCTTTATGGTGAGGGTGAAGATGAAACTAAAGGTGTATATACTGCCAAGCTTGAGGAACTCAAAAAGCATGGTGATCCAATTGATGAGCGTTACAAAGAATTCATGGAGAGGGGTACTATAATCGAACAGTTTGTCTATTGTATAAATAGTTACAGACAAGTTGCAATGTCGAATGATCCCAGATTTGAGCACATTGACATTAACGAGAAACAGAAGGTCATAAATGAATGTGTTGAAGCTGAAAAGTGGTTTAATGAGAAGCAGCAGCAGCAGAACTCACTTCCAAAATATGCCAACCCTGTACTCTTGTCAGCTGAAATAAGAAAGAAAGCTGAAGCTGTCGATAGGTTCTGCAAGCCGATTATGGCAACACCAAGGCCAACCAAGGCGACTACTCCACCAGGACCAGCAACACATCCATCTTCTCAGAGTGATGAACAGCAGCAGCAGCAGCAACCTCCTCAGGGGGATGCTGATGCCAACAGTAATGAGAATGGTGGGAATAGCAGTAGTCAGGCTGCACCAGCGTCTACTGAACCAATGGAAACTGATAAGAAAAGAGAATTTTGGTGGGTTGATAGTGAGTGTGGCTCCTTGGATGATTGGTTGAATTTCTCTGCAATTTTGCTCCCAAAAATTTCATCTCTCGCCATTGCCGTAGGAGAGCACTTCAATTTTCTCTCCAATAAGACAATTCGTTCTTTCCCTTCTCAATTTCCGGCGAGTTCTCCCAATCTTCGATTTTGTTCTGCAACATTTATCGCTTCCAGAATCCAGATCTGGATGGACATGAACCATCGTTTGCATTTGGGGCAACCTTGA 2817 0.4501 MSVVGFDFGNESCVVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRKFADPELQRDLKSLPFLVTEGSDGYPLIHARYMGEAKTFTPTQVFGMMLSNLKEIAEKNLTTAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLIHEMTATALAYGIYKTDLPENDQLNVAFVDVGHASLQVCIAGFKKGQLKVLAHSYDRSFGGRDFDEVLFHHFAEKFKDEYKIDVFQNARACIRLRAACEKIKKMLSANPEAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVENVHTVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALECAILSPTFKVREFQVNESLPFSISLSWKSSGPDAQDNGPENQQSSLVFPKGNPIPSIKALTFYRSGTFSVDVQFGDVSGLQTPAKISTYTIGPFQTTNGEKAKVKVKVRLNLHGIVSLESATLLEEEEVDVPVSKEAAGENTKMDIDEVPAEAAAPPSSNDTGANMENGKASIDASGVEDGIPESGGKPLQTDTDTKVQAPKKKVKKTNIPVVELIYGAMVPVDVQKALVKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVTASERDDFTAKLQEVEDWLYGEGEDETKGVYTAKLEELKKHGDPIDERYKEFMERGTIIEQFVYCINSYRQVAMSNDPRFEHIDINEKQKVINECVEAEKWFNEKQQQQNSLPKYANPVLLSAEIRKKAEAVDRFCKPIMATPRPTKATTPPGPATHPSSQSDEQQQQQQPPQGDADANSNENGGNSSSQAAPASTEPMETDKKREFWWVDSECGSLDDWLNFSAILLPKISSLAIAVGEHFNFLSNKTIRSFPSQFPASSPNLRFCSATFIASRIQIWMDMNHRLHLGQP 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00056 938 PRINTS 70kDa heat shock protein signature 140 160 - -
Gma07g00056 938 PRINTS 70kDa heat shock protein signature 332 348 - -
Gma07g00056 938 PRINTS 70kDa heat shock protein signature 30 42 - -
Gma07g00056 938 PRINTS 70kDa heat shock protein signature 363 383 - -
Gma07g00056 938 PRINTS 70kDa heat shock protein signature 2 15 - -
Gma07g00056 938 Gene3D - 598 706 IPR029048 -
Gma07g00056 938 Gene3D - 38 113 - -
Gma07g00056 938 Gene3D - 5 374 - -
Gma07g00056 938 CDD HSPA4_like_NDB 2 381 - -
Gma07g00056 938 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 851 - -
Gma07g00056 938 MobiDBLite consensus disorder prediction 800 843 - -
Gma07g00056 938 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 599 696 IPR029048 -
Gma07g00056 938 MobiDBLite consensus disorder prediction 783 848 - -
Gma07g00056 938 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 593 IPR029047 -
Gma07g00056 938 PANTHER HSC70CB, ISOFORM G-RELATED 1 851 - -
Gma07g00056 938 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Gma07g00056 938 Gene3D Actin; Chain A, domain 4 230 313 - -
Gma07g00056 938 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Gma07g00056 938 MobiDBLite consensus disorder prediction 522 579 - -
Gma07g00056 938 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Gma07g00056 938 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 629 IPR029047 -
Gma07g00056 938 Pfam Hsp70 protein 3 697 IPR013126 GO:0005524|GO:0140662
Gma07g00056 938 Gene3D - 186 360 - -
Gma07g00056 938 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 712 792 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00056 Gma-Chr7 456493 463541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00056 4 401 Calmodulin-binding Proteins AT1G16030 36.658 1.65e-82 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00056 K09489 - gmx:100780156 1601.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00056 07 456493 463541 Gma07g00056 07 456493 463541 ECH
Gma07g00056 07 456493 463541 Gma08g01894 08 17012537 17019795 GST
Gma13g03214 13 46235965 46239655 Gma07g00056 07 456493 463541 PCT
Gma15g00141 15 1170995 1176511 Gma07g00056 07 456493 463541 PCT
Gma07g00056 07 456493 463541 Gma13g03214 13 46235965 46239655 PCT
Gma07g00056 07 456493 463541 Gma15g00141 15 1170995 1176511 PCT