Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00039 ATGACCATGAACGGCCACCATACCGTTAACATCGCTAACAGTAACAGGCACCCCAACGACGATGACCACCACGCCCTCCCTCCCTCCTCCGACCATGATGATGACGAACAAGAACTCGTGGATCCCGATGATCCTTTTGACATTACTCAAACCAAGAACGTATCGCACGACACGCTTCGCCGTTGGAGACAAGCAGCACTCGTGCTCAATGCGTCCAGGCGTTTTAGATATACTTTGGACTTGAGAAAGGAAGAAGAGAAAGAGCAAAAGAAACACTTGATTAGAGCCCATGCACAAGTCATAAGAGCAGCACTGCTTTTCAGATTGGCCGGTGAACGCGAGCTAGTGATAAGTACAGCAGTGTCACCCCCAACTCCAGTTGGTGACTATGATATTGGGCTCGAACAACTTGTTTCAATGTCTAAGGATCAGAATATTTCTGCTTTACAACAATATGGAGGGATTAGAGGCTTATCAAATTTAATAAAATCTAATCCGGATAAAGGTATTAGTGGAGATGATGCTGATCTGTTAAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAAGGAAGAAGTTTCTGGAGGTTTTTATGGGAAGCTTGGCAGGATCTGACTCTCATAATATTGATAATAGCTGCTGCGGTGTCATTGGCACTTGGAATAAAAACAGAGGGTTTGGCTGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTCTTCTTGTCATTGTAGTTACTGCTGTCAGTGATTATCGGCAGTCTCTGCAGTTTCAGAATTTGAATGCAGAAAAACAAAATATACAATTGGAGGTTATTAGAGGTGGGAGAACAATTAAAATTTCAATATTTGATATTGTTGTTGGTGATGTTATACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTATTAATCACGGGCCATTCACTTGCAATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCACAAGGATCACAAAACACCATTTTTTATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGTGTTATGCTGGTAACTGGTGTTGGTATAAATACTGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGACACTGGAGAAGAGACTCCGTTACAGGTACGTTTGAATGGAGTAGCAACTTTTATTGGTGTAGTTGGGCTTACTGTAGCTGTTTTAGTGCTTGCTGTCCTCTTGGGCAGATACTTTTCCGGCCATACCAAAGATATAGATGGAAATGTTGAATTTGTTGCTGGAAAGACTAGTGTTAGCAATGCAGTAGATGATGTCATCAAAATTTTTACCATCGCAGTCACAATTGTGGTCGTGGCAGTCCCTGAAGGTCTACCTTTGGCTGTTACCTTAACCTTGGCATACTCAATGCGGAAAATGATGGCAGACAAGGCCTTGGTACGGCGGCTATCGGCCTGTGAAACTATGGGCTCTGCCACAACAATTTGCAGTGATAAGACAGGAACATTGACCTTAAATCAGATGACTGTAGTTGAGGCATATGTTGGGAGCACGAAAGTATATTCACCAGATGACTCATCAAAGTTGCATCCAAAAGCATTGTCTCTGATAAATGAGGGCATTGCACAGAATACAACCGGAAATGTTTTTGTACCTAAGGATGGTGGAGAAACAGAGGTGTCTGGATCTCCTACAGAGAAGGCAATTCTTAAATGGGCAGTAAAGTTGGGTATGGATTTTGATGTTATAAGATCAAATTCAACAGTTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGAGAGGTGGTGTTGCTTTGAAGCTGGGGGATTCTGGAGTACATATACATTGGAAGGGAGCTGCAGAGATAGTTCTAGGAACATGTACTCAATATCTTGATTCAGATGGTCAATTGCAATCCATTGAAGAAGAGAAGGGTtttttcaaggatgctattgatgacatggctgctcgcagcttgcgttgtgtagccattgcatacagatcctatgaattagacaaagttccatctagtgagcaggatttagaccaatggtccttaccagaacatgagcttgttttgcttgctattgttggaataaaggatccttgtcgccctggtgtcaaagatgctgtaaaagtatgcactgatgctggtgttaagGTACGCATGGTTACTGGAGACAACCTTCAAACAGCAAAGGCAATAGCTTTGGAGTGTGGCATACTGGCTTCAATTGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAAGAAATTCCGTGAACTATCTGAAAAGGAAAGAGAAGATATTGCCAAGAAAATAACTGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCTCTACGTAAAGGAGGGGAAGTTGTTGCGGTCACAGGAGACGGCACCAATGATGCTCCTGCCCTACATGAGGCTGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTAGACGATAACTTTGCATCAGTGGTAAAGGTTGTCCGATGGGGCCGCTCTGTATATGCAAATATTCAGAAATTTATCCAGTTTCAGCTCACGGTTAATGTTGCTGCTCTTGTAATAAATGTTGTGGCAGCAATAACTTCTGGTGATGTTCCTTTAAATGCAGTGCAGCTTTTGTGGGTCAACCTTATCATGGATACACTTGGGGCGCTTGCACTGGCTACTGAACCGCCAACAGACCGCCTAATGCACAGATCACCAGTTGGCCGAAGAGAATCTCTTATAACAAATATCATGTGGAGAAACTTGATCGTACAGGCTGTCTATCAAATCGCAGTTCTTCTCGTTCTTAACTTTTGTGGTGAAAGTATTCTACCAAAACAAGATACCAAAGCTGATGCCTTTCAAGTGAAGAATACTTTAATATTCAACGCGTTCGTCCTGTGCCAAATATTCAATGAATTCAATGCTCGGAAACCCGATGAAATGAATGTTTTCCGTGGAGTGACGAATAACAAACTTTTCATGGGAATTGTTGGAGTGACCTTTATACTTCAGATAATCATCATCGAGTTCCTTGGAAAGTTCACCTCAACAGTGAGACTTGATTGGAAGCTATGGCTTGCTTCTCTTGGTATTGGCCTTGTCAGCTGGCCCCTTGCTATAGTCGGCAAATTCATTCCAGTTCCCAAAACACCATTGGCTCGTTACTTCTTGAAACCACTCAGGCGATTGAAGAGGTCTAGGTCTCGTGCTACGCAATAG 3273 0.3951 MTMNGHHTVNIANSNRHPNDDDHHALPPSSDHDDDEQELVDPDDPFDITQTKNVSHDTLRRWRQAALVLNASRRFRYTLDLRKEEEKEQKKHLIRAHAQVIRAALLFRLAGERELVISTAVSPPTPVGDYDIGLEQLVSMSKDQNISALQQYGGIRGLSNLIKSNPDKGISGDDADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLALGIKTEGLAEGWYDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVIRGGRTIKISIFDIVVGDVIPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKTPFFMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGVVGLTVAVLVLAVLLGRYFSGHTKDIDGNVEFVAGKTSVSNAVDDVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGSTKVYSPDDSSKLHPKALSLINEGIAQNTTGNVFVPKDGGETEVSGSPTEKAILKWAVKLGMDFDVIRSNSTVLHVFPFNSEKKRGGVALKLGDSGVHIHWKGAAEIVLGTCTQYLDSDGQLQSIEEEKGFFKDAIDDMAARSLRCVAIAYRSYELDKVPSSEQDLDQWSLPEHELVLLAIVGIKDPCRPGVKDAVKVCTDAGVKVRMVTGDNLQTAKAIALECGILASIEDAVEPNIIEGKKFRELSEKEREDIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAITSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDRLMHRSPVGRRESLITNIMWRNLIVQAVYQIAVLLVLNFCGESILPKQDTKADAFQVKNTLIFNAFVLCQIFNEFNARKPDEMNVFRGVTNNKLFMGIVGVTFILQIIIIEFLGKFTSTVRLDWKLWLASLGIGLVSWPLAIVGKFIPVPKTPLARYFLKPLRRLKRSRSRATQ 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00039 1090 MobiDBLite consensus disorder prediction 1 52 - -
Gma07g00039 1090 CDD P-type_ATPase_Ca_PMCA-like 177 935 - -
Gma07g00039 1090 SUPERFAMILY HAD-like 493 907 IPR036412 -
Gma07g00039 1090 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 142 1065 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gma07g00039 1090 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 699 IPR023299 GO:0000166
Gma07g00039 1090 Pfam E1-E2 ATPase 272 473 - -
Gma07g00039 1090 Pfam Cation transporter/ATPase, N-terminus 154 220 IPR004014 -
Gma07g00039 1090 Pfam haloacid dehalogenase-like hydrolase 492 816 - -
Gma07g00039 1090 MobiDBLite consensus disorder prediction 16 33 - -
Gma07g00039 1090 PANTHER CATION TRANSPORTING ATPASE 43 1080 - -
Gma07g00039 1090 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 769 883 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00039 1090 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 430 526 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma07g00039 1090 SMART Cation_ATPase_N_a_2 151 225 IPR004014 -
Gma07g00039 1090 PRINTS Sodium/potassium-transporting ATPase signature 238 258 - -
Gma07g00039 1090 PRINTS Sodium/potassium-transporting ATPase signature 488 509 - -
Gma07g00039 1090 PRINTS Sodium/potassium-transporting ATPase signature 614 632 - -
Gma07g00039 1090 Gene3D - 54 108 - -
Gma07g00039 1090 Gene3D - 203 1054 - -
Gma07g00039 1090 Gene3D - 505 702 IPR023299 GO:0000166
Gma07g00039 1090 PANTHER CALCIUM-TRANSPORTING ATPASE 43 1080 - -
Gma07g00039 1090 SFLD Haloacid Dehalogenase 477 854 - -
Gma07g00039 1090 Pfam Ca2+-ATPase N terminal autoinhibitory domain 43 86 IPR024750 GO:0005516
Gma07g00039 1090 MobiDBLite consensus disorder prediction 1 15 - -
Gma07g00039 1090 Gene3D - 492 847 IPR023214 -
Gma07g00039 1090 PRINTS P-type cation-transporting ATPase superfamily signature 319 333 - -
Gma07g00039 1090 PRINTS P-type cation-transporting ATPase superfamily signature 495 509 - -
Gma07g00039 1090 PRINTS P-type cation-transporting ATPase superfamily signature 695 706 - -
Gma07g00039 1090 PRINTS P-type cation-transporting ATPase superfamily signature 717 727 - -
Gma07g00039 1090 PRINTS P-type cation-transporting ATPase superfamily signature 802 821 - -
Gma07g00039 1090 PRINTS P-type cation-transporting ATPase superfamily signature 826 838 - -
Gma07g00039 1090 SUPERFAMILY Calcium ATPase, transduction domain A 273 368 IPR008250 -
Gma07g00039 1090 ProSitePatterns E1-E2 ATPases phosphorylation site. 497 503 IPR018303 -
Gma07g00039 1090 SUPERFAMILY Calcium ATPase, transmembrane domain M 153 1065 IPR023298 -
Gma07g00039 1090 Gene3D - 176 371 - -
Gma07g00039 1090 Pfam Cation transporting ATPase, C-terminus 887 1062 IPR006068 -
Gma07g00039 1090 SFLD p-type atpase 477 854 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00039 Gma-Chr7 320755 339357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00039 14 1086 Primary Pumps ATPases AT3G21180 77.095 0.0 1676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00039 K01537 - gmx:100777845 2044.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00039 07 320755 339357 Gma07g00039 07 320755 339357 ECH