Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00012 ATGTGGCTGCCAGGTACAAAGACTGCTTCAATAATTAAGAAGGGGGGAGGAAATGGATTGGTGGCAGTTGCCATAGAAAAGGATAACAAAGGGAGCAGACACGCTCTGAAATGGGCTGCTGATACTCTTCTTTCGAGGGGCCAAACTCTTGTTTTAATCCACGTCTTGCACACCACCTCCCCATCTCACGAGGCCATAATATGCAATATCAACACCAACTCCCCAGCTGCATCCCCACATGTCAATATTACAAAGGATCTTTTCCGCACCTTCCATTGCTATTGTTCACGCAAAGATATACAATGCCTTGATGTCCTTCTTGAAGACATGGATGTGGTCAAAGGAATAACAGAATATGTCTCTTATGCTGCAATTGAGAATTTGGTGCTTGGTCAAGCCTCCAGGCATGGCTTTATTAGATTCAAGTCAAGTACGCCAAGCAACATATTAAAGGGGGCGCCAGATTTCTGTACTGTGTATGTGATTTCTAAGGGCAGAATCTCTTCAGTTCGGAGTGCTGCTCGAACAGCCCCACATGCCTCCCCATTGCTGAGGCACATACAGATTCTACATGACGAGAATGCACGTGAGTCTGAGATATCGTCTAAATGTATGGTTTATAACAGGGCATCAATCAAACCTTCCAGCTGGCAGAGTGAATCCATGAAACAATCACAACTTGGCAGAAGAATAAACTTGAGTGGAAGGTCATGCATGGACTTCCCCGAATCCGACTCTGACATATCATTTGTAAGCTCTGAGAGGCCCAGCAGTGTGCGTTCATCCTCTGTTTTCTATGACTATTTTGATCTTCATGCCCGAAATCCACGAACTTCAACCAGTTCAGATCATAGCTTGGGATCAACCCGTATGAGACCCAAGTTCTCTGACCTCAGTTCAACCGACATTTCATTTTCAGAGGATAGCCGCCGATCATCAGTTTCTTCTTCCTTGCTAAACGTTGATGAAGCCGAAGCTGACATGAGGAGCTTGAAGTTGGAGTTAAAGCATACATTGGAAATATACACTACTGCATGCAGAGAAACACTAGCAGCACAACAGAAGTTAGGGGAACTGCAAAACTGGAAAATAGAGGAAGAAAAGAAAATGGAGGAGATGCAGTTGTCCCAGGAAGCAGCAGAGGCAAGTGTGGAGCAAGAGAAAGCAAGAAGTAAAGCAGCAAGGGAAACAGCTAAAGCAGCAAAGAGAATAGCAAGGGTGGAATCGAGTAAAAGAGAAAGTGTAAAAGTGAAAGCCCTTAAAGAAGCAGAGGAAATGAGGAAACAATTGGACAATCTAACCCAAAACGACAAAAGATATAGGAGATACACAATAGAGGAGATTGAAAGAGCCACAGACATGTTCTCAGAAGCAAGGAAGATAGGGGAAGGGGGGTATGGACCTGTGTACAAGTGTTACCTAGATCATACACAAGTGGCGGTGAAGGTTCTGCGTCAAGATTCAGCTCAAGGGGAGGCACAGTTTCAGCAAGAGGTGAACATACTGGGGTGCATAAGACATCCAAACATGGTGCTGCTAATAGGAGCATGTGCAGAGCACGGAATACTGGTATATGAATATATGGCGAAAGGAAGCTTGGAAGACTGTATGTTTGGAAAGAAGAAGGAGAAGGAGGGAAAGATGAGGAGTTGGAAGGTAAGGTTTGGAATAGCAGCGGAGATAGCAACGGGGTTGCTGTTCCTACATCAGACGAAGCCAGAACCATTGGTGCACAGGGATCTGAAACCGGGGAACATATTGCTGGACCAGAATTACGTGAGCAAGATAAGTGACGTTGGATTGGCGAAACTAGTACCGGCAGCAACGGCGGGGAACGGGACGCAATGCTGCATGACAGCAGCAGCGGGAACATTCTGCTATATAGATCCGGAGTATCAGCAGACGGGAATGCTAGGGGTGAAGTCAGACGTATACTCTCTGGGGATAATTCTACTACAGTTGTTGACGGGAAGGCCTGCCATGGGACTGGCACACCAGGTTGAGGAGTCGATCAAGAAGGACAGGTTTGGTGAAATGCTGGACCCCTCTGTCCCGGACTGGCCTCTGGAACAAGCCCTCTGCCTTGCAAACTTGGCTCTCCAATGTGCACAGCTCAGGCGAAAGGACCGCCCAGACCTTGCCACACTCGTATTGCCTCGCCTCCAAATCTTGCGAGACTTTGCTTCCCTTCATTCATCCACCTCTTCCGATCAAGGGCCCAATGATCACTAA 2232 0.4686 MWLPGTKTASIIKKGGGNGLVAVAIEKDNKGSRHALKWAADTLLSRGQTLVLIHVLHTTSPSHEAIICNINTNSPAASPHVNITKDLFRTFHCYCSRKDIQCLDVLLEDMDVVKGITEYVSYAAIENLVLGQASRHGFIRFKSSTPSNILKGAPDFCTVYVISKGRISSVRSAARTAPHASPLLRHIQILHDENARESEISSKCMVYNRASIKPSSWQSESMKQSQLGRRINLSGRSCMDFPESDSDISFVSSERPSSVRSSSVFYDYFDLHARNPRTSTSSDHSLGSTRMRPKFSDLSSTDISFSEDSRRSSVSSSLLNVDEAEADMRSLKLELKHTLEIYTTACRETLAAQQKLGELQNWKIEEEKKMEEMQLSQEAAEASVEQEKARSKAARETAKAAKRIARVESSKRESVKVKALKEAEEMRKQLDNLTQNDKRYRRYTIEEIERATDMFSEARKIGEGGYGPVYKCYLDHTQVAVKVLRQDSAQGEAQFQQEVNILGCIRHPNMVLLIGACAEHGILVYEYMAKGSLEDCMFGKKKEKEGKMRSWKVRFGIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDQNYVSKISDVGLAKLVPAATAGNGTQCCMTAAAGTFCYIDPEYQQTGMLGVKSDVYSLGIILLQLLTGRPAMGLAHQVEESIKKDRFGEMLDPSVPDWPLEQALCLANLALQCAQLRRKDRPDLATLVLPRLQILRDFASLHSSTSSDQGPNDH 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00012 743 Coils Coil 370 390 - -
Gma07g00012 743 SMART serkin_6 455 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00012 743 ProSiteProfiles Protein kinase domain profile. 455 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00012 743 Coils Coil 416 443 - -
Gma07g00012 743 SUPERFAMILY Protein kinase-like (PK-like) 437 717 IPR011009 -
Gma07g00012 743 Gene3D - 21 328 - -
Gma07g00012 743 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 29 162 - -
Gma07g00012 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 576 588 IPR008271 GO:0004672|GO:0006468
Gma07g00012 743 CDD STK_N 20 165 - -
Gma07g00012 743 PANTHER BNAA05G18880D PROTEIN 17 732 - -
Gma07g00012 743 Coils Coil 321 341 - -
Gma07g00012 743 PANTHER OS02G0152300 PROTEIN 17 732 - -
Gma07g00012 743 Pfam Protein kinase domain 456 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00012 743 MobiDBLite consensus disorder prediction 277 302 - -
Gma07g00012 743 Gene3D Phosphorylase Kinase; domain 1 424 527 - -
Gma07g00012 743 Gene3D Transferase(Phosphotransferase) domain 1 528 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00012 Gma-Chr7 143143 146101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00012 1 728 Receptor kinase-like Gene Family AT1G78940 54.278 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma07g00012 Pkinase 6.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00012 - - gmx:100818471 1364.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00012 07 143143 146101 Gma07g00012 07 143143 146101 ECH
Gma13g03342 13 47387314 47393574 Gma07g00012 07 143143 146101 PCT
Gma15g00008 15 68864 73028 Gma07g00012 07 143143 146101 PCT
Gma07g00012 07 143143 146101 Gma13g03342 13 47387314 47393574 PCT
Gma07g00012 07 143143 146101 Gma15g00008 15 68864 73028 PCT