Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma07g00008 ATGAATACGACGATGATGAGTGCATTAAACATCTATGGCTATGTCGTTGCGGCTGTTGTTGTGTTCCTTATATTATTGCTTTGGCAGCGGAACAGATTTTTCTTCGCTTCATCTCCGTCGTCTCCATCCGCTTCCTTACTGCTTTCCGATTCTATCAATTCAAACTCAAGCTCCAGAAGCAGAACCTCAAATTTTGTGACAGATGCAGATTTGAAATTTTTAATGGAGATTTTGGATGAGAAGCTCGACAGTGATAAATGGGAGGATGTTCTAGATAAAAGAAACCATCATCTATGCTACAGTGTGAAATGCTGCAAGCCTAAGAATGGTCCCCTGAAATATTTGAGCAAGACTGTGTTCAATGACATTTCATCTGAGATGCTAAGAAACTTCTACATGGACAATGATTACAGAAAGCAGTGGGATAAAACACTGGTTGAGCATAATCAACTGCAGGTAGACAAATCTGATGGTACTGAAGTTGGTCATACAATTAAAAAGTTCCCTCTTTTAAAGCCCAGAGAATATGTGCTAGCTTGGAAGTTGTGGGAGGGGAGTGATGAAACATTTTACTGTTTTATGAAGGAATGCGAGCATCCTTTGGCACCACGACAAAGAAAATATGTACGAGTTGAGTTTTTTAGATCTGGCTGGCGAATAAGAGAAGTACCTGGTAGCAATGCCTGTGAGATCACAATGTTTCATCAAGAAGATGCTGGTTTAAATACGGAGATGGCTAAGCTGGCTTTTCGCAAGGGCATATGGAACTATGTATGCAAGATGGATAATGCACTTAGAAGATACTCTGTTATAAGCTATCATTTATTGAGTTCAGTTAGCACTTCGGTGGATTTAATGCAGAAGGTACCCGCTTGCTTGGACCTTATTTCGAGTAACATCTCTCCAGCAAATGCTACCGTCTTCCATGATCAAGTTACTGATGAATCTCAAATTAGGATGATCCTAAGAAGGCCATCAAGAAAGTTGATAGCCAATGTAAGCGTGGGGCTAGATCAAACCAAAGCAAACAAAGTTAAATTTTCAGCCCTTAATGTGATGTATACAAGCTTAAACTCCCCTTCAAAGCTGAGTGGCTGGAAATCAAGTGGAGGCGTTCCCTGTGGCGACTCCTGGGAAGGAATCAAATGCTCAGGCTCTTCTGTCACAGAAATAAATTTATCTGACATGGGACTTTCCGGATCAATGTACAGTGATTTGAGCAACAACAACCAAAAGGGTGATATACCATATCGACTTCCTCCAAATGCTCGTTATATAAATCTTGCACATAATCAGCTCAAAAACCAGTTGGGCGATATGTTTGGGAAGCTCAGTAATCTCAAACAACTGGATGTATCACTTAATTCACTATCAGGAAACCTACCCCAGAATCTCAAATCGCTCAAAAACCTCAACAAGTTGCACCTACAAAACAACATTTCACTGGTTCAGAATGTTGAAAACAACAAATTTACTGGTTGGGTTCCTAAGGAGTTAAAGGATATAAATAGCTTGCAAACTGGAGGAAACTCTTGGTCAAGTGGACCAGCACCTCCTCCTCCTCCTGGTACTCCCCCTATCAAGCATTCCGAGAAAAAGAATGATAAATCTGTTATTAGTGGAGTAGCTATAGCCGGCATAGCCTTTGGCGTACTAGCAGTAATTATAATTGTTGTTGCTCTTTCTAAAAGATCATCAAAACCTGCTTCACATTTTATCGATGAAGAGAGGCGTAGCCAGCATAGATCTTTTACAACCCTTGCATCTGAGGAGTTATCAAAAGATTCGGATCAAAGGAGAATCCTCGGGAGACTAAAGACAGAAAATAAGAAATATAGAGAAAAACAGAACGCTAAGGATCTGCAATGGACAGTCCTTCCCATGCCAAATGTCACCCGCAGCTTATTCCAATTTCTCCCCGTCTTTGTCATATTGGTAACAGGATTTAAGTCAATGGATTCCACATCAATTGACGTAAAGGCTTCGCAAAATTCTCCATCAATTGGTGTTAGGTCGTCAGTCTCCGATTGTGTGCAATCCTTTAATGACAACGAGTTTGCAAATCGTCTAAATTCTAGGAGAAGTTCATCAATCCGTGTTACTACTTTTACACAAGCAGAATTGCAGTCTGCTACTGCTAATTTTGCTTCAGGTCGACTTCTTGGTGAAGGATCCATAGGATGTGTCTATCGGGCTAAATATGCTGATGGAAAGTATAAAATAGTCATGGATACACTAGTATATGTATACGACTTCAGAAAACCACTAACTTGGAACACCAGAGTCAGAATTGCATTGGGAGCAGCTCGGGCTGTTGAGTACCTACAGGAAATTTGCTCGCCTCCTTTATTGCACAAGAATATTAAGTCTTCCAATATTATGCTTGACACAGATCTGAATCCTCGTCTCTCAGACTATGTTAATATTGGCCTTAGTTACTTGTTAGCCCGTACGGTTTGTTTCATCGTCTTTATTTCCCCACAAATTCTTATAGCTTCGTTGGCGGCGTCTTTTTCCCTATTCCCCTCCCCTGTGGTGCGTACTAGCCAAAATCTTGGGGCAGGATATAATGCACCAGAATGCGCAAAACCTTCAGCCTATACCCAGAAGAGTGATGTATACAGTTTTGGAGTAGTGATGCTTTCAAAGCCAAAAGCAGCACAATGTCTGGTTCGTTGGGCCACCCCACAGCTTCATGACATTAATGCTGTGGAAAAAATGGCGGACCCTGCCTTGCGGGGCTTTACCCTCCTAAGTCACTCTTCCGATTTGCTGATATCATCGTCCTCTGTGTTCAGTCTGAGCCTGAATTTCGGCCACCTGTGTCAGAGTTAG 2835 0.4152 MNTTMMSALNIYGYVVAAVVVFLILLLWQRNRFFFASSPSSPSASLLLSDSINSNSSSRSRTSNFVTDADLKFLMEILDEKLDSDKWEDVLDKRNHHLCYSVKCCKPKNGPLKYLSKTVFNDISSEMLRNFYMDNDYRKQWDKTLVEHNQLQVDKSDGTEVGHTIKKFPLLKPREYVLAWKLWEGSDETFYCFMKECEHPLAPRQRKYVRVEFFRSGWRIREVPGSNACEITMFHQEDAGLNTEMAKLAFRKGIWNYVCKMDNALRRYSVISYHLLSSVSTSVDLMQKVPACLDLISSNISPANATVFHDQVTDESQIRMILRRPSRKLIANVSVGLDQTKANKVKFSALNVMYTSLNSPSKLSGWKSSGGVPCGDSWEGIKCSGSSVTEINLSDMGLSGSMYSDLSNNNQKGDIPYRLPPNARYINLAHNQLKNQLGDMFGKLSNLKQLDVSLNSLSGNLPQNLKSLKNLNKLHLQNNISLVQNVENNKFTGWVPKELKDINSLQTGGNSWSSGPAPPPPPGTPPIKHSEKKNDKSVISGVAIAGIAFGVLAVIIIVVALSKRSSKPASHFIDEERRSQHRSFTTLASEELSKDSDQRRILGRLKTENKKYREKQNAKDLQWTVLPMPNVTRSLFQFLPVFVILVTGFKSMDSTSIDVKASQNSPSIGVRSSVSDCVQSFNDNEFANRLNSRRSSSIRVTTFTQAELQSATANFASGRLLGEGSIGCVYRAKYADGKYKIVMDTLVYVYDFRKPLTWNTRVRIALGAARAVEYLQEICSPPLLHKNIKSSNIMLDTDLNPRLSDYVNIGLSYLLARTVCFIVFISPQILIASLAASFSLFPSPVVRTSQNLGAGYNAPECAKPSAYTQKSDVYSFGVVMLSKPKAAQCLVRWATPQLHDINAVEKMADPALRGFTLLSHSSDLLISSSSVFSLSLNFGHLCQS 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma07g00008 944 Pfam START domain 82 238 IPR002913 GO:0008289
Gma07g00008 944 PANTHER OS01G0253100 PROTEIN 337 436 IPR045271 GO:0004714|GO:0006468
Gma07g00008 944 SUPERFAMILY Bet v1-like 74 268 - -
Gma07g00008 944 ProSiteProfiles Protein kinase domain profile. 660 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00008 944 PANTHER OS01G0253100 PROTEIN 747 928 IPR045271 GO:0004714|GO:0006468
Gma07g00008 944 MobiDBLite consensus disorder prediction 505 533 - -
Gma07g00008 944 Pfam Leucine rich repeat N-terminal domain 349 384 IPR013210 -
Gma07g00008 944 Pfam Protein kinase domain 753 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00008 944 SUPERFAMILY Protein kinase-like (PK-like) 694 881 IPR011009 -
Gma07g00008 944 ProSiteProfiles START domain profile. 83 270 IPR002913 GO:0008289
Gma07g00008 944 Gene3D Phosphorylase Kinase; domain 1 676 747 - -
Gma07g00008 944 Gene3D Transferase(Phosphotransferase) domain 1 748 927 - -
Gma07g00008 944 SUPERFAMILY L domain-like 368 506 - -
Gma07g00008 944 Gene3D Ribonuclease Inhibitor 344 518 IPR032675 -
Gma07g00008 944 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 337 436 - -
Gma07g00008 944 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 438 744 - -
Gma07g00008 944 PANTHER OS01G0253100 PROTEIN 438 744 IPR045271 GO:0004714|GO:0006468
Gma07g00008 944 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 747 928 - -
Gma07g00008 944 SMART serkin_6 715 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma07g00008 944 CDD START_STARD2_7-like 66 268 - -
Gma07g00008 944 Gene3D - 60 270 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma07g00008 Gma-Chr7 107594 123070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma07g00008 333 915 Strubbelig Receptor Gene Family AT1G78980 42.635 6.34e-152 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma07g00008 START 2e-09 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma07g00008 - - gmx:100785529 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00008 07 107594 123070 Gma07g00008 07 107594 123070 ECH
Gma07g00008 07 107594 123070 Gma08g02077 08 18626818 18633766 GST