Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02852 ATGGCTGGGATTGATGATAATGTTGCCCTTACTGGTGATTGGGGTCTTGCTAGCCCAAGTCCAAGGACCTTTTTTTCCAGAATGTTAGAAGAAGATAGTGTGACAAGATCAATCTCAGAACATTCTGGAAGTGGTAGAACTGGGGATCCCTTTTCGGGACATCGCGAGCCTAGTGAGATGAGGAAAGAAAACATGAAAGATAGGGCACAGGATGGTGATTCTGGAGCCCAATTGACTGACGTGAGTTTTCAGACCGAGCAGAAGCCGAGCTCTCGGGGTGGTCTTGTTGAAAGAATGGCTGCTAGAGCTGGGTTTAATGCTCCGAGGTTGAATACAGAAAGCATTAGATCTACTGACCTTTCACTTAATTCCGACATTCAGTCTCCTTACTTGACCATCCCACCTGGTCTCAGTCCTACTACACTTTTAGATTCTCCAGTGTTCCTTGCAAATTCACTGGCACAGCCATCTCCAACAACCGGAAAGTTCCTGTTCATGGTTAATGGCAACATGCGGCACTCAGAATTATCATCTGATGCTCCAGAAAAATGTAAACACAATGGCTTTGATGATATCTACACATCATCCTTTGCTTTCAAGCCTGCAACAGATTCAGGCTCCTCTTTTTATCATGGTGCTGGAAGAAAAATAAATCCAACTACACTTCCTCAACAATCCCTTCCTGGTGTTGAGGTTTCGGCTCAGTCTGAAAATTCTTTTCAATGTCAAAGTGTTGATGCTGTCAAAGCTCAAACTGAGAACAAAAGTGGCCTTCATCTTCAGGAAGACTTTGTTGAATCGCCTCCTCAAAAAGATAATGGAATTAAAATGTTCTCAGCCAATCAAAGGGCTTTTCATGCTGTTGGCAGTGGCATTGAACATTCTACACCAGTTGAAGAGCAAGCAGATGAAGAAGGAGATCAAAGAGTCAATGGAGATTCAATGGCTGGTGGTGTTGGTGCACCATCTGAAGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTGAAGGGCAGCGAGTACCCACGGAGTTACTACAAGTGTACTCATCCGAACTGTCAGGTTAAGAAGAAAGTAGAACGATCTCATGAGGGCCACATAACTGAGATCATCTACAAGGGAACGCACGACCATGCAAAACCTCCTCCAAATCGCCGGTCAAGTATAGGTTCGGTTAACCTTCATACTGACATGCAAGTGGACAACCCTGAACACGTTGAACCACACAATGGTGGTGATGGTGACTTGGGCTGGGCTAATGTACAAAAGGGAAATATAGCTGGAGCTGCTAATTGGAAGCATGAAAACATTGAAGCCACATCATCAGCATCTGTTGGCCCTGAATACTGCAACCAGTCCCCCAATTTGCAGGCTCAAAATGGTACTCACTTAGATTCAGGAGAGGCGGTGGATGCCTCATCTACTTTTTCTAATGAAGAAGACGATCAAGTCACTCATGGTAGTGTATCATTAGGTTATGATGGGGAAGGAGATGAATCTGAGTCTAAGAGAAGGAAACTGGAATCATATGCAGAGTTGAGTGGAGCTACTAGAGCCATTCGCGAGCCTAGAGTTGTTGTACAGACTACCAGCGAAGTAGATATCCTCGATGATGGTTATCGGTGGCGGAAATATGGGCAAAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACGAATGCAGGGTGCACGGTCAGGAAGCATGTGGAGAGAGCATCACATGACCTTAAATCTGTAATCACAACATACGAGGGAAAACATAACCATGATGTTCCTGCTGCTCGTGCCAGCAGTCACGTCAACGCTAATGCTTCCAATGCCGTTCCTGGCCAAGCTTCTCTTCAGACTCATGTTCATAGACCCGAACCATCTCAAGTTCACAATGGCATTGGAAGGCTTGAGAGGCCTTCTCTTGGCTCATTCAACCTACCCGGGAGGCAGCAACTAGGACCATCCCATGGCTTCTCCTTTGGTATGAACCAATCCATGCTATCAAATCTGGTGATGTCAGGGTTAGGCCACGCGCAAGCAAAGCTTCCTGTCATGCCTGTTCATCCGTTCTTGGCAGCgcaacaacaacatcaacagcgacaacaacatcaacagcagcagcaacatcaacagcagcagcaacaacatcaacagcaacagcaacatcaacaacaacaaTGCGCTGCAAATGATTTGGGTTTCATGTTGCCAAAGGGAGAGCCAAATGTGGAGGCTATTCCTGAACATGGTGGCCTTAACCTGTCAAATGGCTCATCAGTGTACCAAGAAATGATGAGTCGCATGCCTCTTGGACCTCATATGTAA 2331 0.4372 MAGIDDNVALTGDWGLASPSPRTFFSRMLEEDSVTRSISEHSGSGRTGDPFSGHREPSEMRKENMKDRAQDGDSGAQLTDVSFQTEQKPSSRGGLVERMAARAGFNAPRLNTESIRSTDLSLNSDIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMVNGNMRHSELSSDAPEKCKHNGFDDIYTSSFAFKPATDSGSSFYHGAGRKINPTTLPQQSLPGVEVSAQSENSFQCQSVDAVKAQTENKSGLHLQEDFVESPPQKDNGIKMFSANQRAFHAVGSGIEHSTPVEEQADEEGDQRVNGDSMAGGVGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGTHDHAKPPPNRRSSIGSVNLHTDMQVDNPEHVEPHNGGDGDLGWANVQKGNIAGAANWKHENIEATSSASVGPEYCNQSPNLQAQNGTHLDSGEAVDASSTFSNEEDDQVTHGSVSLGYDGEGDESESKRRKLESYAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNANASNAVPGQASLQTHVHRPEPSQVHNGIGRLERPSLGSFNLPGRQQLGPSHGFSFGMNQSMLSNLVMSGLGHAQAKLPVMPVHPFLAAQQQHQQRQQHQQQQQHQQQQQQHQQQQQHQQQQCAANDLGFMLPKGEPNVEAIPEHGGLNLSNGSSVYQEMMSRMPLGPHM 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02852 776 MobiDBLite consensus disorder prediction 444 486 - -
Gma06g02852 776 SUPERFAMILY WRKY DNA-binding domain 322 382 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g02852 776 SMART WRKY_cls 323 381 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02852 776 SMART WRKY_cls 537 596 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02852 776 MobiDBLite consensus disorder prediction 294 328 - -
Gma06g02852 776 Pfam WRKY DNA -binding domain 324 379 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02852 776 Pfam WRKY DNA -binding domain 538 594 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02852 776 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 106 671 IPR044810 GO:0003700
Gma06g02852 776 MobiDBLite consensus disorder prediction 75 91 - -
Gma06g02852 776 Gene3D WRKY domain 524 590 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g02852 776 ProSiteProfiles WRKY domain profile. 532 597 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02852 776 MobiDBLite consensus disorder prediction 624 652 - -
Gma06g02852 776 MobiDBLite consensus disorder prediction 444 506 - -
Gma06g02852 776 SUPERFAMILY WRKY DNA-binding domain 529 597 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g02852 776 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 106 671 - -
Gma06g02852 776 Coils Coil 695 715 - -
Gma06g02852 776 MobiDBLite consensus disorder prediction 694 759 - -
Gma06g02852 776 Gene3D WRKY domain 318 383 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g02852 776 MobiDBLite consensus disorder prediction 694 732 - -
Gma06g02852 776 MobiDBLite consensus disorder prediction 52 70 - -
Gma06g02852 776 MobiDBLite consensus disorder prediction 1 93 - -
Gma06g02852 776 ProSiteProfiles WRKY domain profile. 324 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02852 Gma-Chr6 52343544 52347612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02852 1 771 WRKY Transcription Factor Family AT5G56270 46.750 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma06g02852 WRKY 4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02852 K18835 - gmx:100127395 1511.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01052 04 12615531 12620196 Gma06g02852 06 52343544 52347612 GST