Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02835 ATGAAGAGTCATCATTTCCAAATCAAGCACAAAACTATCTTCTGGGAAATGCTTCTTCAATATGTCTTAAACCAAGCCCTCATCACGCAAAAAGAAGCACATGACTCTGACCAAAACAACATGTCAACAAAGAACCACAGAACCGTACATGATTTCAAGGTTCCCAACAACAATGTTTCTGAGATGATAAGGAGCAGCTTGGCCATCAACATGGACTTCATTGAACAACATCACAAGAAAGAGAAACCAGAAGCTGCGTTTCCAAGTTGGTTTTCGACGCATGAGAGGAAACTGTTACAGTCTTCAACGATAAAGGCACACATTGCTGTGGCGAAAGATGGTTCGGGGAATTTCAAGACTGTGCAAGATGCTCTCAATGCTGCGGCAAAGGGGAAAGAGAAAACAAGATTTGTGATACATGTCAAGAAAGGAGTGTATTGA 441 0.415 MKSHHFQIKHKTIFWEMLLQYVLNQALITQKEAHDSDQNNMSTKNHRTVHDFKVPNNNVSEMIRSSLAINMDFIEQHHKKEKPEAAFPSWFSTHERKLLQSSTIKAHIAVAKDGSGNFKTVQDALNAAAKGKEKTRFVIHVKKGVY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02835 146 SUPERFAMILY Pectin lyase-like 102 146 IPR011050 -
Gma06g02835 146 PANTHER PECTINESTERASE 1 51 - -
Gma06g02835 146 PANTHER PECTINESTERASE 54 146 - -
Gma06g02835 146 PANTHER PECTINESTERASE 1 51 - -
Gma06g02835 146 PANTHER PECTINESTERASE 54 146 - -
Gma06g02835 146 Pfam Pectinesterase 108 146 IPR000070 GO:0030599|GO:0042545
Gma06g02835 146 Gene3D - 49 146 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02835 Gma-Chr6 52188121 52188729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02835 49 146 Carbohydrate Esterase AT3G47400 44.340 2.16e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02835 K01051 - gmx:100806133 205.297