Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02834 ATGCTGGTTGGTGATGGGTTGAGAAATACCATAATCACCAGTGCCAGAAGTGTTCAAGATGGTTATACCACCTATAGCTCAGCAACTGCTGGGATAGATGGCCTTCACTTCATCGCACGCGACATCACTTTCCAAAACACTGCCGGTCCTCACAAGGCGTGGCATGATGGGTTACCAAGACACCCTCATGGCTCATGCACAGCGCCAATTTTATGGCCAATGTTACACCTTCATATTTGGTAA 243 0.4774 MLVGDGLRNTIITSARSVQDGYTTYSSATAGIDGLHFIARDITFQNTAGPHKAWHDGLPRHPHGSCTAPILWPMLHLHIW 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02834 80 SUPERFAMILY Pectin lyase-like 1 59 IPR011050 -
Gma06g02834 80 PANTHER PECTINESTERASE 1 53 - -
Gma06g02834 80 PANTHER PECTINESTERASE 1 53 - -
Gma06g02834 80 Pfam Pectinesterase 1 52 IPR000070 GO:0030599|GO:0042545
Gma06g02834 80 Gene3D - 1 65 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02834 Gma-Chr6 52187147 52188082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02834 1 52 Carbohydrate Esterase AT5G51490 78.846 5.06e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02834 K01051 - gmx:100806133 103.99