Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02832 ATGTCTTATCTTCTGCAGGATCTAGACCACAGAGAGAAAGAGCTCAGAAGAGAGAGGGAGAATATGAATAATTTTTCCCATGTTCCCCCTGGTTTTAGATTCCACCCTACTGACGAAGAACTTGTTGATTACTACCTAAGGAAGAAAGTTACCTCAAGAGGGATTGACCTCGATGTCATAAAAGATGTTGACCTCTATAAAATTGAGCCATGGGACCTTCAAGAGCTTTGCAGAATAGGAGCACAAGAGCAAAATGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACAAATAGAGCAACAGCAGCAGGGTTTTGGAAGGCAACTGGAAGAGACAAAGCAATCTACTCAAAGCATGACTTGATAGGGATGAGGAAAACCTTAGTCTTTTATAAAGGTCGAGCCCCAAATGGACAAAAATCAGATTGGATCATGCACGAGTATCGACTTGAAACAGATGAAAATGGCGCACCACAGGCAAAAGGATGGGTTGTGTGTAGAGTATTCAAAAAGAGACTAACAACCATGCGTAAACTGAGTGAGCATGATTCTCCCTGTTGGTATGATGACCAAGTCTCTTTCATGCAAGACTTGGACTCACCAAAGCAAAGCTCTCAACCTAATTTGCCCTACCAGCAGTTCCAATATTCTTGCAAGAAAGAGTTGGATTTGTCATACCATTTACCTGTCCAGCTTCCATTGGAGAACCAAAAATTGCTCCAATCTGCCTCCAACTCAATGACACCATATGGTATAGAAGAAAACCCTAATGCCATGCAGCCAGCATCATCAATGATGCAACAAGTTCAACAACAAAATTTTCAGGCTGTAGTGTTTGGAAACAATGCCAATGATCAACAAGTGACTGATTGGAGATCTCTTGACAAGTATGTTGCTTCACAACTTAGTCAAGAAGATGCATCCAAAGATCACAATAGATACTCAAACACAGGCAACATTTTTCAAGTGAAGAACAATAGCAATATTGAACAGTTGAGGGACTTGGACAAGGATGAAATGATGCCTGAAAATGCCTCAACATCGAACTCAAGCTGTCCAATTAACATGTGGAAATAG 1095 0.4082 MSYLLQDLDHREKELRRERENMNNFSHVPPGFRFHPTDEELVDYYLRKKVTSRGIDLDVIKDVDLYKIEPWDLQELCRIGAQEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGAPQAKGWVVCRVFKKRLTTMRKLSEHDSPCWYDDQVSFMQDLDSPKQSSQPNLPYQQFQYSCKKELDLSYHLPVQLPLENQKLLQSASNSMTPYGIEENPNAMQPASSMMQQVQQQNFQAVVFGNNANDQQVTDWRSLDKYVASQLSQEDASKDHNRYSNTGNIFQVKNNSNIEQLRDLDKDEMMPENASTSNSSCPINMWK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02832 364 Coils Coil 5 25 - -
Gma06g02832 364 MobiDBLite consensus disorder prediction 343 364 - -
Gma06g02832 364 Gene3D NAC domain 37 180 IPR036093 GO:0003677|GO:0006355
Gma06g02832 364 Pfam No apical meristem (NAM) protein 29 156 IPR003441 GO:0003677|GO:0006355
Gma06g02832 364 ProSiteProfiles NAC domain profile. 28 177 IPR003441 GO:0003677|GO:0006355
Gma06g02832 364 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 25 355 - -
Gma06g02832 364 SUPERFAMILY NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
Gma06g02832 364 MobiDBLite consensus disorder prediction 348 364 - -
Gma06g02832 364 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 25 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02832 Gma-Chr6 52158511 52167466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02832 22 364 NAC Transcription Factor Family AT1G12260 57.022 8.94e-132 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma06g02832 NAM 4.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02832 - - gmx:100775867 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02832 06 52158511 52167466 Gma06g02832 06 52158511 52167466 ECH
Gma04g01086 04 14075752 14078099 Gma06g02832 06 52158511 52167466 GST