Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02828 ATGGACCCGAAGCCAAATCTTAACCCTGTCCTTACTGATGCCACACCCTTAACAAGGTCAAGGCTTGGTGTGCCTTCTGGTTTGTCACCTTACTCTCCTAAAGGGGCAACCTTTCCCCATGGTACCATGCTGGCAATACCAAGGAAGAAGACAGGAATTCTTGATGATTTTCGTTCTAGCGGTTGGCTGGATGCGATGAAATCGTCTTCTCCTACTCACAATAAAGTATCCAAGGATCTTGGTCATGGGATTGGATCACCTGATGCTGCTTATAGTACCTGGCTGCTAAAGTTTCCATCAGCACTTGCATCTTTTGATCAAATTACCAACTGTGCAAAAGGAAAGAGAATAGCATTGTTTCTGGATTATGATGGAACTCTTTCACCCATTGTGGACAATCCTGACTGTGCTTTCATGTCAGACAATATGCGTGCTGCTGTTAAAAAAGTGGCGGAATATTTTCCAACCGCGATAATTAGTGGAAGAAGCCGTGACAAGGTATATGAATTTGTTGGACTAAGTGAGCTCTATTATGCTGGTAGTCATGGAATGGACATTATTGGTCCTCCTAGACAATCTAATTCTGATAATCACCCTGATTGCATAAGGTCTTCTGACCAGCAGGTACTAGTTTCAAAGTTTCAGACATATTTGGATGCTGATCAACTAATCTTTGAACAGGTACGTGGGTTGCTCAAGGAGTGTATAAAAGATATAGAAGGAGCAACAGTTGAGAACAACAAATTTTGTGTGTCTGTGCATTACCGCAATGTAGATGAGGAGAGTTGGCAAATTGTGGGACAACATGTATATGATATTCTGAAGGAGTATCCACGTCTGCGTGTCACTCATGGCCGGAAGGTTTTAGAGGTTCGGCCAGTGATTGACTGGGATAAGGGAAAAGCTGTCACATTTCTACTTGAGTCACTTGGACTTAACAATTGCGATGACGTGCTAGCTATATATGTTGGAGATGATAGAACAGATGAAGATGCATTCAAGGTTTTGAGAGAAGTTAATAAAGGTTGTGGCATCTTAGTGTCCCCTGCCCCAAAAGAAAGCAACGCAATTTACTCTcttcgtgatccctgtgagGTCATGGAATTTCTGACATCACTTGCTGTATGGAAATCAAGCATTCAAGCTCGCTGA 1152 0.4175 MDPKPNLNPVLTDATPLTRSRLGVPSGLSPYSPKGATFPHGTMLAIPRKKTGILDDFRSSGWLDAMKSSSPTHNKVSKDLGHGIGSPDAAYSTWLLKFPSALASFDQITNCAKGKRIALFLDYDGTLSPIVDNPDCAFMSDNMRAAVKKVAEYFPTAIISGRSRDKVYEFVGLSELYYAGSHGMDIIGPPRQSNSDNHPDCIRSSDQQVLVSKFQTYLDADQLIFEQVRGLLKECIKDIEGATVENNKFCVSVHYRNVDEESWQIVGQHVYDILKEYPRLRVTHGRKVLEVRPVIDWDKGKAVTFLLESLGLNNCDDVLAIYVGDDRTDEDAFKVLREVNKGCGILVSPAPKESNAIYSLRDPCEVMEFLTSLAVWKSSIQAR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02828 383 TIGRFAM T6PP: trehalose-phosphatase 114 374 IPR003337 GO:0003824|GO:0005992
Gma06g02828 383 Gene3D - 217 382 IPR023214 -
Gma06g02828 383 Gene3D - 117 200 IPR023214 -
Gma06g02828 383 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 2 383 IPR044651 GO:0004805|GO:0005992
Gma06g02828 383 Pfam Trehalose-phosphatase 120 363 IPR003337 GO:0003824|GO:0005992
Gma06g02828 383 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 2 383 - -
Gma06g02828 383 CDD HAD_TPP 118 368 - -
Gma06g02828 383 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 119 337 IPR006379 -
Gma06g02828 383 SUPERFAMILY HAD-like 118 375 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02828 Gma-Chr6 52104149 52107100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02828 113 374 Trehalose Biosynthesis Gene Families AT1G70290 24.731 1.46e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02828 K01087 - gmx:100783008 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01088 04 14319676 14322414 Gma06g02828 06 52104149 52107100 GST