Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02819 ATGTCTCAGCATTCCTCATCTTCGGTTGTTGCTCTTGCAATCAAGGGTGACAAGAAAAGCAAATATGTGGTACAGTGTGCACTTAATAAGTTTGTTCCAGAGGGAATGATTATTTTCAAGCTGATTCATGTCCATGCTGGTATTAAAGGAGTTCCAACGCCATTGGGAAATGTGATCCCTCTTTCACAAGTGCGTAATGATGTAGCAACTGCATTCAAAAAGGAAGTGGAGTGGCAAACAAATCAAATGCTTCTACCTTTCAAGATAATGTGTGAGCAAAGAAAGGTGCATGTGGATGTTGTAGTGATTGAATCAGATGATGTGGCAACTGCAGTAGCAGAGGAAGTAGCTAAGGGTGCCATAACCAAACTTGTTGTTGGAGCTTCATCTCACGGCTTATTTAAAAGTAAACAGAAAGGTATGTCTACGAAAATATCAGTATGCACACCAAGATTTTGTACAATTTATGCTATTTCAAAGGGAAAATTGTCCATACGCCCATCAGACATGCCGATTGGTGGAAGCATTATAGATGATGCCAGTGAAAGTGAAACCAGTTTGTCCACCAGCAGCTCATCTAACTACAACTCCACCTCTCAGACAGAATCTGCCTCTGTTTCATCATATGCTGGTTTACAATCCTCTTCGCTAACAACACAACGATTCCAAGCTCTTTCAAGTATAAATAGTGCTCTTCTAAGCACAAATCCAAGTTTTCCTGACACTAACCATTCTAGAGGCCAATCTCTAGATCTTGGGACAGAAAATACTGCTACAAGTTCTGCCAGAAACTCGGACATTGATCATGCCTTAAGTCGAGTCTCTAGTTGCAAAAGCTTTATTTCAGATACTGAATCTTGGATGTATGATCAAAATTCTAGCAAGGAAGTGCAACTAGAAACTACACTTCCATCACCTAATAGGCAGGCAAAATTTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCCCAAGGACTGCATGCAGTAGCTCAAAGTGAGAAAATTGAAGCATCCCGAAAGCTAAATGAGCTAAGCAAGAGACGATCAGAAGAAACCATGAAAACTAAAGAGATTATTGCTAAGGAGGAGAAGGCAAAAGATCTAGCAAGACTAGAAAGAGATAAATATCAAGATGCATCAAGAGAAGCTGCATATTTGAAAGAATGTGCTGAAAGAGAAGCTGCAGAAAGGAAAGAAACAGAGTTGAAAGCCATTCTTGCTGCAAAAGAGACAAAAAAGCTGGAGGGTGCTCTAAGTGGTTCCACACCCCAGTACCGGAAGTTTGCCTGGGATGAAATAGTCTTAGCTACTTCATCTTTCTCTGAAGATCTGAAAATTGGAATGGGAGCATATGGAATAGTGTATAAGTGCAATCTGTATCACACAAATGTTGCTGTGAAAGTTCTCACTCTCAACCCCAATGAAAACCGCAAAAGGAAACAATTTCAGCAGGAGTTAGAGATTTTGAGCAGAATTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCCAGATCACGGATGCCTTGTGTATGAATATATGGAGAATGGTAACTTGGAGGACAGACTACTAAGAAAAAACAACACTTCCCCAATCCCATGGTTTGAGAGGTTTCGAATAGCCTGGGAAGTTGCATCAGCTCTCGCCTTTCTTCATAGCTCAAAGCCAGAACCTATCATTCATCGTGATTTGAAACCGGCAAACATCTTGCTTGATCGTAACCTTGTCAGCAAGATCGGTGACATTGGCCTTTCTACAGTGCTTCATTCAGATAATTTGTCTACCATGTACAAGGACACTGCACCTGTTGGGACACTCAGCTACATAGATCCTGAGTATCAAAGGACCGGGTTAATATCTCCAAAATCTGATGTTTATGCTTTTGGAATGGTGATCTTACAGTTATTGACAGCAAAACCAGCAATAGCACTTGCTCATAAGGTGGAAACAGCTATTGATGGCGGGAATTTAACTGACATATTGGATACAGAAGCAGGAGCTTGGCCATATCAAGAGACACTAGAGTTGGCTTTGCTAGGACTGAGCTGTGCAGAACTTCGGCGTAGAGACCGGCCTGATTTACAAGATCACGTGCTTCCAACACTAGAGAGATTGAAACAAGTTTTTGATAGGGCCCAACATTCTGCTTCAATTGTTACTATTAAATCCAAACCTCCTAATCACTTTATCTGTCCAATACTTCAGGATGTGATGGATGACCCTTGTGTTGCTGCTGATGGATACACATATGATCGCAAAGCAATTGAAAAGTGGCTTGAAGAGAACCACAAATCACCAATGACGAACATGGCTTTACCTCATAAGCATTTAATTCCTAATTACACACTTCTCTCAGCAATTTTGGAGTGGAAGTCCAGAGAATCGTGA 2400 0.41 MSQHSSSSVVALAIKGDKKSKYVVQCALNKFVPEGMIIFKLIHVHAGIKGVPTPLGNVIPLSQVRNDVATAFKKEVEWQTNQMLLPFKIMCEQRKVHVDVVVIESDDVATAVAEEVAKGAITKLVVGASSHGLFKSKQKGMSTKISVCTPRFCTIYAISKGKLSIRPSDMPIGGSIIDDASESETSLSTSSSSNYNSTSQTESASVSSYAGLQSSSLTTQRFQALSSINSALLSTNPSFPDTNHSRGQSLDLGTENTATSSARNSDIDHALSRVSSCKSFISDTESWMYDQNSSKEVQLETTLPSPNRQAKFNLELEKLRIELRHAQGLHAVAQSEKIEASRKLNELSKRRSEETMKTKEIIAKEEKAKDLARLERDKYQDASREAAYLKECAEREAAERKETELKAILAAKETKKLEGALSGSTPQYRKFAWDEIVLATSSFSEDLKIGMGAYGIVYKCNLYHTNVAVKVLTLNPNENRKRKQFQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGNLEDRLLRKNNTSPIPWFERFRIAWEVASALAFLHSSKPEPIIHRDLKPANILLDRNLVSKIGDIGLSTVLHSDNLSTMYKDTAPVGTLSYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALAHKVETAIDGGNLTDILDTEAGAWPYQETLELALLGLSCAELRRRDRPDLQDHVLPTLERLKQVFDRAQHSASIVTIKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLEENHKSPMTNMALPHKHLIPNYTLLSAILEWKSRES 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02819 799 ProSiteProfiles Protein kinase domain profile. 443 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02819 799 ProSitePatterns Protein kinases ATP-binding region signature. 449 470 IPR017441 GO:0005524
Gma06g02819 799 SMART serkin_6 443 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02819 799 Pfam Protein kinase domain 445 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02819 799 MobiDBLite consensus disorder prediction 179 199 - -
Gma06g02819 799 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 728 799 IPR013083 -
Gma06g02819 799 MobiDBLite consensus disorder prediction 237 264 - -
Gma06g02819 799 SUPERFAMILY Protein kinase-like (PK-like) 424 700 IPR011009 -
Gma06g02819 799 PANTHER OS02G0152300 PROTEIN 5 795 - -
Gma06g02819 799 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 5 795 - -
Gma06g02819 799 Coils Coil 362 382 - -
Gma06g02819 799 SMART Ubox_2 732 794 IPR003613 GO:0004842|GO:0016567
Gma06g02819 799 SUPERFAMILY RING/U-box 727 797 - -
Gma06g02819 799 CDD STK_N 9 161 - -
Gma06g02819 799 Gene3D Phosphorylase Kinase; domain 1 421 517 - -
Gma06g02819 799 Coils Coil 395 415 - -
Gma06g02819 799 Coils Coil 316 350 - -
Gma06g02819 799 MobiDBLite consensus disorder prediction 174 199 - -
Gma06g02819 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 563 575 IPR008271 GO:0004672|GO:0006468
Gma06g02819 799 Gene3D Transferase(Phosphotransferase) domain 1 518 727 - -
Gma06g02819 799 ProSiteProfiles U-box domain profile. 728 799 IPR003613 GO:0004842|GO:0016567
Gma06g02819 799 Pfam U-box domain 730 797 IPR003613 GO:0004842|GO:0016567
Gma06g02819 799 CDD RING-Ubox_WDSUB1_like 733 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02819 Gma-Chr6 52024214 52031044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02819 7 796 U-box Gene Family AT4G25160 52.068 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma06g02819 Pkinase 1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02819 - - gmx:100818628 1506.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01102 04 14888254 14895977 Gma06g02819 06 52024214 52031044 GST