Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02816 ATGGCAGAGGATAGTCCTTATTCTTCTCCTCCTCCAACATCATTAGCTAATGCTCCTTTGGGTTTCGAGTGTGATCTTCTTAGTGAACCATCTTCAGGACATATTTTCTCGCGTTGGCTCCCAATCCACCAAGTCGCCGTCATCGACAGCCAAAGCAATGGTAAGTCCAGTGTCCTCGAAGCACTCATCGACTGCGTCTTTCTCCCACGTGACAATGAAATTTGCACGCGCCTGCCCCTCGTCCTACAGCTCGTCCAAACCAAGGTCACCAACAACGACGATGATGAGTACGACAAGTTCCTCCACCTCCTCAGCCGCAAATTCCACGACTTCTCCGAGATTCGCAGGGAAATTCAGGGTTTTATCTCATTAACGTTTCTTCTCTTCACTCTGCCCGCTGCATCAATGGCTTCAGAGAAGAAACTTTCGAACCCAATGAGGGAGATAAAAGTGCAGAAGCTCGTCCTCAATATCTCTGTTGGCGAGAGTGGAGATCGTCTCACCAGAGCCTCCAAGGTGTTGGAACAACTTAGTGGCCAAACCCCAGTGTTTTCCAAAGCAAGGTACACTGTTCGTTCCTTTGGGATTAGAAGAAATGAGAAGATTGCATGCTATGTCACTGTCAGAGGTGACAAGGCAATGCAACTTTTGGAGAGTGGTTTGAAGGTGAAGGAATATGAACTTCTCAGAAGGAACTTCAGTGATACTGGTTGCTTCGGCTTTGGTATTCAGGAGCATATTGATTTGGGAATCAAGTATGATCCTTCAACTGGTATTTATGGAATGGATTTCTTTGTTGTTCTGGAGCGACCTGGCTATCGTGTTGGACGTCGCCGAAGATGCAAGTCCCGTGTTGGAATTCAGCACCGAGTCACAAAGGAGGATGCTATGAAGTGGTTCCAGGTGAAGTACGAGGGAGTGATCCTTAACAAGTCCCAGGCTATTCTTTAG 951 0.4732 MAEDSPYSSPPPTSLANAPLGFECDLLSEPSSGHIFSRWLPIHQVAVIDSQSNGKSSVLEALIDCVFLPRDNEICTRLPLVLQLVQTKVTNNDDDEYDKFLHLLSRKFHDFSEIRREIQGFISLTFLLFTLPAASMASEKKLSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02816 316 Pfam Dynamin family 45 119 IPR045063 -
Gma06g02816 316 Gene3D - 136 312 IPR022803 -
Gma06g02816 316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 121 IPR027417 -
Gma06g02816 316 ProSitePatterns Ribosomal protein L5 signature. 174 190 IPR020929 GO:0003735|GO:0005840|GO:0006412
Gma06g02816 316 Pfam Ribosomal protein L5 144 197 IPR031310 -
Gma06g02816 316 Pfam ribosomal L5P family C-terminus 201 299 IPR031309 -
Gma06g02816 316 SMART dynamin_3 17 290 IPR001401 GO:0003924|GO:0005525
Gma06g02816 316 PANTHER 60S RIBOSOMAL PROTEIN L11-1 123 315 - -
Gma06g02816 316 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 123 315 IPR002132 GO:0003735|GO:0005840|GO:0006412
Gma06g02816 316 PRINTS Dynamin signature 67 84 IPR022812 -
Gma06g02816 316 PRINTS Dynamin signature 42 60 IPR022812 -
Gma06g02816 316 SUPERFAMILY RL5-like 143 308 IPR022803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02816 Gma-Chr6 52003216 52008357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02816 136 315 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 96.111 8.58e-128 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02816 K02868 - gmx:100819731 340.117