Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02800 ATGGGTTCTAATAGGCCAATTCTAATGACAGTACCATCTCCAACAACTTCTAGTAGTAATAACCAACAACAACAAGATCACCCTCTCACCTCTATTGATCCTGAGCTTCCAAAATCAAACTCAAGTTCCATCAACCCTTTTGAGAACACTTTCAACAACTCATCATCACGCAGAAGTTCTGCTGGGAGCAGGAGCAGCAACAACTCTATCCATGAAGTGATTAGTTTGAGCCGTTCAGAATCCAAAACCAAACCTCTTAAGTACTATGGCTCATCAAAGGGTGGTGGTGGTGCAGATTCTGAAGGACTCAGCATGTCACAAAGGGAACTAAGAGATGAGGATGCAAGGTTAGTGTACATAAACGACCCTTTGAAAACAAATGAGGCTTTTGAGTTTTCAGGAAACTCAATCCGCACAAGCAAATACTCCCTCCTCACTTTCATTCCAAGGAACCTCTTTGAACAGTTCCACAGGGTTGCCTATGTGTACTTTCTCATAATTGCAATCCTCAACCAGCTTCCTCAGCTTGCAGTGTTTGGAAGAACAGTTTCCATCTTGCCACTGGCCTTTGTGCTGTTTGTCACAGCTGTGAAGGATGTGTATGAGGATTGGAGAAGGCACCAGAGTGATAAAATTGAGAACAATAGGTTGGCATCAGTTATTATGGTTGATGATGATGGAGGAGGAGGAGGTGGAGGAGGAAGAAGAAGAAGCTTTGTGGAGAAAAAATGGAGGGATGTTAGAGTTGGTGAGGTGATAAAGATCGAGGCAAATGAAACCATCCCTTGTGACATTGTGTTGCTCTCAACTAGTGATCCAACTGGGGTTGCATATGTGCAGACTATAAATCTTGATGGTGAGTCCAATTTGAAGACAAGGTATGCAAAGCAAGAGACACATGGTAAGGAAATGTTTGGTGGGGTTATCAAGTGTGAGAAACCAAATAGGAACATTTACGGATTTCTTGCTAACATGGAAGTTGATGGCAAGAAGTTGTCACTTGGATCATCAAACATTGTGCTTAGAGGATGTGAACTCAAGAACACTAGTTGGGCTATTGGTGTAGCTGTGTATTGTGGGAGTGAGACCAAGGCTATGCTGAATAACTCAGGAGCTCCTTCGAAGAGAAGCCGGTTGGAGACACGCATGAATTCAGAGATCATTTGGTTATCTTTCTTCCTTGTGATGCTGTGTACAGTCACCTCAGCTTGTGCTGCTGTGTGGCTGAAGCGCCACAAGGAAGAGCTGAATCTGTTGCCATATTATAGGAAACTTGATTTTTCAGAAGGGGATGTGGATAGCTATGAATACTATGGATGGGGGTTGGAAATTTTCTTCACATTTCTCATGTCAGTCATAGTTTTCCAGGTCATGATTCCCATTTCCTTGTACATTTCCATGGAACTTGTGAGGGTTGGTCAGGCCTACTTCATGATCCAAGACAAGAGAATGTATGATGAGGCGACAAAGTCAAGGTTTCAGTGCAGGGCTCTGAACATCAATGAAGATTTGGGGCAGATTAAGTATGTTTTCTCTGACAAAACTGGCACTCTCACTCAGAACAAGATGGAGTTTCAATGTGCAAGCATCTGGGGGGTTGATTACAGTTCTAAAGAGAACAATAGCATAATGGAGGGGGATGAGCTTGTTGAACATTATGTGGAAGCGGATGGAAAGATCTTCAGACCAAAGATGAAAGTGAAAGTTAATCCAGAGCTTTTGCAGCTATCAAGAAGTGGACTTCAAAATGTGGAGGGAAAATGGATTCATGATTTCTTTCTGACACTGGCAACCTGCAACACCATTGTGCCTCTTGTTGTTGACACACCTGACCCTGATGTCAAGCTGATAGATTACCAAGGAGAATCACCAGATGAACAAGCACTGGCTTATGCTGCTGCTGCCTATGGTTTTATGCTCATAGAACGAACCTCTGGCCATTTAGTCATTGATATTCATGGACAAAGACAAAAGTTCAATGTCTTGGGTATGCATGAATTTGACAGTGACAGGAAGAGAATGTCAGTTATATTGGGGTACCCTGACAATTCAGTGAAAGTTTTTGTCAAAGGAGCAGACACATCCATGCTTAATGTGATAGACAGGTCATTCAAAATGGACTTAGTAAGAGCCACTGAAGCACATCTTCACTCTTACTCTTCCATGGGTTTGAGGACTCTTGTTATCGGCATGAGAGACTTGAATGCTTCAGAATTTGAGCAATGGCATGCATCCTTTGAGGCAGCAAGCACTGCTGTGTTTGGAAGGGCTGCGATGCTCCGCAAGGTTTCGAGCATCGTAGAGAACAGTCTCACCATATTAGGTGCATCTGCCATTGAAGATAAGCTGCAACAAGGTGTGCCAGAATCCATTGAGTCTCTAAGGATTGCAGGCATTAAAGTATGGGTTCTGACTGGAGACAAACAAGAAACTGCCATATCCATTGGCTACTCCTCAAAGCTCCTAACAAGCAACATGACTCAGATTATAATCAATAGCAAGAACAGAGAATCATGCAGAAAAAGTTTGCAAGATGCCCTTGTCATGTCGACATCTGGCGTTGCCAACAATGCTGGAGTAAGTTCCCATGTGACTCCAGTAGCCTTGATTATGGATGGTACCAGCCTTGTGCATATTCTTGACAGTGAACTTGAAGAACAGCTATTTCAACTTGCAAGTAGGTGTTCTGTTGTTCTATGTTGCCGTGTCGCTCCGCTGCAAAAGGCTGGAATTATTGCCCTTGTGAAGAATAGAACATCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATTCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAAGGCCGGCAAGCTGTAATGGCATCTGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTCTTATTGATACATGGTCATTGGAACTACCAACGGCTTGGTTACATGATACTGTACAATTTTTACAGAAATGCTGTCCTTGTTCTTGTCCTATTTTGGTATGTGCTCTTCACTGCCTTCACTTTGACAACTGCTATAAATGAATGGAGCTCCACGTTATACTCAATAATCTACAGTTCATTGCCAACTATAATTGTTGGTATTCTCGACAAGGATCTTGGTAAAAGGACTCTCCTTAAGTATCCTCAACTTTATGGGGCAGGACAGAGACATGAGGCCTACAACAAGAAATTATTTTTGTTAACAATGTTAGATACTTTGTGGCAAAGCATGGTTATCTTCTGGGCACCCCTCTTTGCATATTGGAGTAGCACAATTGATGTGGCAAGCATTGGAGACCTTTGGACTTTAGGAGTTGTTATTTTGGTTAATTTACACTTGGCCATGGATGTCATAAGGTGGTATTGGGTGACACATGTTGTCATTTGGGGGTCCATTGTTGCAACTTTCATTAGTGTCATGATCATTGATTCTATCCCCAATCTTCCTGGCTACTGGGCCTTCTTTGATGCTGCAGGAACTGGATTGTTCTGGTTATTGTTGCTTGGAATCATAGTAACAGCATTGCTTCCGCATTTGGTTGTAAAATTTGTTTATCAATACTATTTTCCTAATGATATTCAGATTTGTAGAGAAGCAGAGAAGATTGGGTATGACAGGGTTGTTGAAAGTGGACAGGTAGAAATGCTTCCTATCTCAGATAATCCATCAAGATAA 3684 0.4232 MGSNRPILMTVPSPTTSSSNNQQQQDHPLTSIDPELPKSNSSSINPFENTFNNSSSRRSSAGSRSSNNSIHEVISLSRSESKTKPLKYYGSSKGGGGADSEGLSMSQRELRDEDARLVYINDPLKTNEAFEFSGNSIRTSKYSLLTFIPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRTVSILPLAFVLFVTAVKDVYEDWRRHQSDKIENNRLASVIMVDDDGGGGGGGGRRRSFVEKKWRDVRVGEVIKIEANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETHGKEMFGGVIKCEKPNRNIYGFLANMEVDGKKLSLGSSNIVLRGCELKNTSWAIGVAVYCGSETKAMLNNSGAPSKRSRLETRMNSEIIWLSFFLVMLCTVTSACAAVWLKRHKEELNLLPYYRKLDFSEGDVDSYEYYGWGLEIFFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIQDKRMYDEATKSRFQCRALNINEDLGQIKYVFSDKTGTLTQNKMEFQCASIWGVDYSSKENNSIMEGDELVEHYVEADGKIFRPKMKVKVNPELLQLSRSGLQNVEGKWIHDFFLTLATCNTIVPLVVDTPDPDVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHLVIDIHGQRQKFNVLGMHEFDSDRKRMSVILGYPDNSVKVFVKGADTSMLNVIDRSFKMDLVRATEAHLHSYSSMGLRTLVIGMRDLNASEFEQWHASFEAASTAVFGRAAMLRKVSSIVENSLTILGASAIEDKLQQGVPESIESLRIAGIKVWVLTGDKQETAISIGYSSKLLTSNMTQIIINSKNRESCRKSLQDALVMSTSGVANNAGVSSHVTPVALIMDGTSLVHILDSELEEQLFQLASRCSVVLCCRVAPLQKAGIIALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMILYNFYRNAVLVLVLFWYVLFTAFTLTTAINEWSSTLYSIIYSSLPTIIVGILDKDLGKRTLLKYPQLYGAGQRHEAYNKKLFLLTMLDTLWQSMVIFWAPLFAYWSSTIDVASIGDLWTLGVVILVNLHLAMDVIRWYWVTHVVIWGSIVATFISVMIIDSIPNLPGYWAFFDAAGTGLFWLLLLGIIVTALLPHLVVKFVYQYYFPNDIQICREAEKIGYDRVVESGQVEMLPISDNPSR 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02800 1227 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 897 1012 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma06g02800 1227 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 443 550 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma06g02800 1227 ProSitePatterns E1-E2 ATPases phosphorylation site. 513 519 IPR018303 -
Gma06g02800 1227 SUPERFAMILY Calcium ATPase, transmembrane domain M 132 1193 IPR023298 -
Gma06g02800 1227 CDD P-type_ATPase_APLT_Dnf-like 134 1086 - -
Gma06g02800 1227 Pfam Phospholipid-translocating P-type ATPase C-terminal 954 1194 IPR032630 -
Gma06g02800 1227 SUPERFAMILY Calcium ATPase, transduction domain A 236 365 IPR008250 -
Gma06g02800 1227 MobiDBLite consensus disorder prediction 1 107 - -
Gma06g02800 1227 Gene3D - 619 750 IPR023299 GO:0000166
Gma06g02800 1227 Gene3D - 200 368 - -
Gma06g02800 1227 SFLD Haloacid Dehalogenase 495 977 - -
Gma06g02800 1227 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 132 1201 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gma06g02800 1227 PRINTS P-type cation-transporting ATPase superfamily signature 511 525 - -
Gma06g02800 1227 PRINTS P-type cation-transporting ATPase superfamily signature 926 945 - -
Gma06g02800 1227 SUPERFAMILY HAD-like 506 981 IPR036412 -
Gma06g02800 1227 Pfam Phospholipid-translocating ATPase N-terminal 118 184 IPR032631 -
Gma06g02800 1227 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 14 1227 - -
Gma06g02800 1227 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 517 786 IPR023299 GO:0000166
Gma06g02800 1227 SFLD p-type atpase 495 977 IPR044492 -
Gma06g02800 1227 MobiDBLite consensus disorder prediction 1 86 - -
Gma06g02800 1227 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 14 1227 - -
Gma06g02800 1227 Gene3D - 770 966 IPR023214 -
Gma06g02800 1227 Pfam Cation transport ATPase (P-type) 618 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02800 Gma-Chr6 51867877 51873970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02800 75 1227 Primary Pumps ATPases AT5G04930 67.670 0.0 1649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02800 K14802 - gmx:100813836 2336.22