Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02781 ATGAAGGTGATTTCCCATACACTGGCAGCGCGAATAGAAGTTGTTGACAGAGCCAAGGTAAGTCATCTTGTGAGGGAAGGAGATGAGTATGTTTTTGATACAACCCGTATTTATGGTCAATTCAAGTGGAATTATGAGCCTAGGCTTTTGGATGAAGTCGATCCCAATGACTCTACTAATGATTATGCCATGCCATATCCTTTAATTATAAGGGCCAAGAATATTGGGAATGTAGCTAGATTTATGAATCATAGTTGCTCCCCAAATGTTTTCTGGCAGCCTGTCGTGTATGAAGAAAACAACCAATCCTACTTCCATGTTGCATTTTTTGCACTCAGACACATTCCACCAATGACAGAGTTAACATATGACTATGGAATTGCCCAGTCAGATCATGCTGAGGGTAGCAGCAGTGCAGAAACCAAAGGGAGAAAGAAATGCTTATGCGGATCATCAAGATGCTGCGGTTCTTTTGGTTAA 480 0.4125 MKVISHTLAARIEVVDRAKVSHLVREGDEYVFDTTRIYGQFKWNYEPRLLDEVDPNDSTNDYAMPYPLIIRAKNIGNVARFMNHSCSPNVFWQPVVYEENNQSYFHVAFFALRHIPPMTELTYDYGIAQSDHAEGSSSAETKGRKKCLCGSSRCCGSFG 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02781 159 Gene3D SET domain 4 158 IPR046341 -
Gma06g02781 159 SUPERFAMILY SET domain 17 156 IPR046341 -
Gma06g02781 159 Pfam SET domain 58 126 IPR001214 GO:0005515
Gma06g02781 159 ProSiteProfiles Post-SET domain profile. 143 159 IPR003616 -
Gma06g02781 159 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 13 157 - -
Gma06g02781 159 SMART set_7 5 132 IPR001214 GO:0005515
Gma06g02781 159 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 13 157 - -
Gma06g02781 159 ProSiteProfiles SET domain profile. 10 126 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02781 Gma-Chr6 51645692 51646171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02781 13 159 Su(var)3-9 homologs AT5G04940 56.463 6.68e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma06g02781 SET 2.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02781 K24405 - gsj:114416384 336.65