Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02774 ATGACAACAGAAGCTGAGACTGAGAGGGTAGTGGTGATCCAGGATGCATCAAGAGATGTTAATTCAAATGCAATCCTAAGGGCCCTGGAATGGTTTTCTGTTAAAGCTGGAGATCAGCTTATAATTGTTGCTATCCTTGATTGGATTAGCAGTCCTATGGGTTACATGGTCAGAGTTGATTCCAGTTCAATGATTTCAACAAACAAGAAAATAATTGAAAAAAGGCTTACCAAAATAAAGGAAGAATATCTTAGGAACCAGAACATCGAGGAGATCTCCAACTACTGTAAATTGAATGAGATTGGATTCCAATTAGAAGTACTTGTAGGCTCTACTGCAGAGGTTGCTTCTAATGCTGCTAAGGAATTTCAGGCGACAAGGTTGATACTAGTTAGACAAATTCACAAAGATATGAAGCATTTCATGCGCAACCTCCCTTGTGGTATGTATAGGATAACAAGTGACAATTCAATTGAGAGGTTGAAAGATCCAAAATCAGCAGTCAGTACCAAAACATTTGCCGACAAGCAAGAAAATGTAAGCTATAAAGAAATGTTTCCAGGAAGTGAAgaggaggaacgttctcttctcaTGTCTAGGTCTTCATCAAGTGATCTGTTGACACCAACTGTAGTTTCAAGTCAGTGGAGTACAGAAGTCTCCACTTCTAGTTTTGGAAGCTTGCGGCATGGCTGTCAATACCAAGAGGGAAAGTTTTATTCAAATATAGAACAAGAAACAACATGGAACCGATCACTATTTCACATTTCGGAGAATGAAGAAACAAGTCAAATAGAAGTAAATCAAAAGGAGCAGAACAGCAGAAATAACGAAGCATCTCATATGGAGGAAGAATTCACAAATCCATTTTGTTCCGTGTGCAATAATAGACGGCCAAAAATTGGATTGAAGAGAGATTTCAGTTATGCGGAGCTTCATACTGCGACACAAGGATTTTCTCCTAAGAACTTTCTGTCAGAAGGTGGATTTGGATCTGTCTACAAAGGGCTGCTGAATGGAATGAAGATTGCTGTTAAGCAACATAAATATGCAAGCTTCCAAGGAGAGAAGGAATTTAAGTCTGAAGTGAATGTGCTTAGCAAAGCAAGACATGAGAATGTGGTTGTGCTGCTAGGTTCATGCTCAGAAAAAAACGATAGGCTTCTTGTGTATGAATATGTCTGCAATGGCTCTCTTGACCAACATATATCAGAACACTCTCGATCACCTCTTAGTTGGGAAGATAGGATCAACGTAGCTATTGGAGCTGCCAAAGGCTTACTATACTTGCACAAGAACAACATAATACACAGAGATGTGAGACCAAACAATATCCTTATTACACACGATTATCAACCATTGCTGGGAGACTTTGGATTAGCAAGAAATCAAAATCAAGACTCGATACACTCAACGGAAGTTGTTGGAACTTTGGGGTACTTGGCACCCGAATATGCAGAACTTGGCAAAGTGTCTGCCAAAACAGATGTATATTCTTTTGGGGTGGTTCTACTGCAACTAATAACAGGAATGAGAACTACAGATAAAAGACTCGGAGGAAGAAGTCTTGTGGGATGGGCAAGGCCACTTTTAAGAGAAAGGAACTATCCAGATTTAATTGATGAAAGGATCATCAACTCTTATGATGTCCATCAACTATTTTGGATGGTTCGAATAGCAGAAAAATGTCTAAGCAGGGAGCCTCAAAGGAGACTAAATATGGTGAAGGTTGTTGATGCTCTAACTGACATAGTGGAAGGCAGAACATGTGACATCAGATTAAGGGATTACTCCCCTGCAAGGTCAGATTCAACCAATGGTGTATCAGACTCTGATGAATCTAAAGATGAAATGCAGGAACCCTTCAGGTTTGAAGAGGAGTTACTAAGTCACAGTTCAGAATCCATAGAAAATAACAACATAAGTCAGATGATGCAGATGATTGTAAGACAGCCACCATCCCCTCCAATTCAGAGCATCTTTTCATGTATCTCAAGCTCATATAAGTTTCATTATGAGTCAACTAGTGATGGTGAAGCACAGAATGAAGGGGAAATAGAAATATCAAATTCGAATGGAGGGTTACTATATTCTTAG 2097 0.3887 MTTEAETERVVVIQDASRDVNSNAILRALEWFSVKAGDQLIIVAILDWISSPMGYMVRVDSSSMISTNKKIIEKRLTKIKEEYLRNQNIEEISNYCKLNEIGFQLEVLVGSTAEVASNAAKEFQATRLILVRQIHKDMKHFMRNLPCGMYRITSDNSIERLKDPKSAVSTKTFADKQENVSYKEMFPGSEEEERSLLMSRSSSSDLLTPTVVSSQWSTEVSTSSFGSLRHGCQYQEGKFYSNIEQETTWNRSLFHISENEETSQIEVNQKEQNSRNNEASHMEEEFTNPFCSVCNNRRPKIGLKRDFSYAELHTATQGFSPKNFLSEGGFGSVYKGLLNGMKIAVKQHKYASFQGEKEFKSEVNVLSKARHENVVVLLGSCSEKNDRLLVYEYVCNGSLDQHISEHSRSPLSWEDRINVAIGAAKGLLYLHKNNIIHRDVRPNNILITHDYQPLLGDFGLARNQNQDSIHSTEVVGTLGYLAPEYAELGKVSAKTDVYSFGVVLLQLITGMRTTDKRLGGRSLVGWARPLLRERNYPDLIDERIINSYDVHQLFWMVRIAEKCLSREPQRRLNMVKVVDALTDIVEGRTCDIRLRDYSPARSDSTNGVSDSDESKDEMQEPFRFEEELLSHSSESIENNNISQMMQMIVRQPPSPPIQSIFSCISSSYKFHYESTSDGEAQNEGEIEISNSNGGLLYS 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02774 698 ProSiteProfiles Protein kinase domain profile. 319 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02774 698 PANTHER TYROSINE KINASE FAMILY PROTEIN 11 610 - -
Gma06g02774 698 Pfam Protein tyrosine and serine/threonine kinase 324 580 IPR001245 GO:0004672|GO:0006468
Gma06g02774 698 SUPERFAMILY Protein kinase-like (PK-like) 303 581 IPR011009 -
Gma06g02774 698 Gene3D Transferase(Phosphotransferase) domain 1 394 596 - -
Gma06g02774 698 ProSitePatterns Tyrosine protein kinases specific active-site signature. 435 447 IPR008266 GO:0004672|GO:0006468
Gma06g02774 698 MobiDBLite consensus disorder prediction 598 620 - -
Gma06g02774 698 Gene3D Phosphorylase Kinase; domain 1 292 393 - -
Gma06g02774 698 SMART tyrkin_6 319 581 IPR020635 GO:0004713|GO:0006468
Gma06g02774 698 PANTHER OS01G0253100 PROTEIN 11 610 IPR045271 GO:0004714|GO:0006468
Gma06g02774 698 MobiDBLite consensus disorder prediction 675 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02774 Gma-Chr6 51571434 51582296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02774 307 587 Trihelix Transcription Factor Family AT5G38560 45.667 2.89e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma06g02774 PK_Tyr_Ser-Thr 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02774 - - gsj:114417376 1309.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g01159 04 16555748 16561814 Gma06g02774 06 51571434 51582296 GST