Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02769 ATGGCAACAAAAGCACTCATTACCATCCAAAGTTTTCTTGGCTTCATGACCGTCTTCACCATGGCAAGTGCACAATCCCCAAACTACATGAATGATGACTGCCACAACTCAACAACACAACAAGCCCTAACCCTAACATACCAAACCAACCTTCACAACACCCTCTTGTGGCTGTCTTCTGATGCTGCCACAAGCAAAGGATACAATCACACCACCACAGGAAATGGCACAGTTGATGCTGTATATGGCCTCTATGATTGCAGGGGTGATGTCACAGGATCCTTCTGCCAGTTTTGTGTCTCCACTGCAGCCTCAGAAATTCTTCAACGCTGTCCTAACAGATCTTCTGCTGTGATATGGTATAACTACTGCATTCTCAGGTACTCAAACCATAACTTCTTTGGGAACCTTACCACAACTCCATCATGGCAAATTGTAGGGTCCAAGAACACAACTAATCCAGAAGAGCTTCAGAAATCTGAGGATTACATGCAAAGTTTGAGAAGAGAAGCCACTGTGGAGACCAACAAATTATATGCAATGGGAGGGTTCAATTTGAGTAATGGTGAGGAAAGGTATGGGTTGGTGCAGTGCAGTAGGGACCTTACTAATGTTGAGTGCAGTCAGTGTTTGGAGGCTATGTTAGTCAAAGTTCCTCAGTGTTGTGCTGCAAACCTAGGATGGCAAGTTTTGGCTCCAAGTTGTCTTATAAAGTATGATGATTATATGTTCTACCAGATTACTAATCAAACATCTTCTCTTTTGCCTAATCCAGCTAAGAAGGGAGGTAAAATTAAGTCAACAACCTTGATCATAATCATAGTGAGTGTATTGGTGGCACTAGCTTTAGTAGTTTGCTCTATCTACTACTTGTGGAGGCAGTATCTGTCAAACAAAGATGGATTGCTATCAGTGAACACCCCTACATCTTTTCATGGCCATGTTCAAAGAGAAGATGCATTGACTGTAGACCTTCCTACAATCCCTTTAATTTGGATTcgacagagcactaataacttttcagagttggataaattaggagaaggtggatttggtcctgtttacaagggtaatttagaagatggaacagaaattgctgtcaaaagactctctaaaacatctggtcaaggtttggaggagttcaagaatgaagtgatcttcatagccaaactgcaacataggaaccttgtgagactcttgggttgctgtattgaggaaaatgaaaagctgcttgtgtacgagtacatgccaaattctagccttgactctcacttgttcaATAAGGaaaaaagaaagcaactagattggaagttaagactgagcattatcaatggaattgcaaaaggacttctataccttcatgaagactctagacttagagtaatccatagagatctgaaagccagcaatgttcttctggatcaagacatgaatccaaaaatatcagattttggattggcaagaacatttgaaaaaggccagagtcaggaaaatacaaaaagagttatgggcacctatggttacatggctccagaatatgcaatggaagggttgtattcagtgaaatctgatgttttcagctttggagttcttttactagaaatcatatgtgggaaaaggaatagtggattctatctttcagaacatggtcaaagtcttcttgtatatAGTTGGAGACTTTGGTGTGAAGGAAAAAGCttggaattgttggatcaaatactggaaaagacatataaaaccagtgaagttatgaggtgcatacacattgTTGGAAGGCAGACCAAAGAAGAAGAATCAACATCAAAAACTTCCAAGGATCCTTCTGTTAATGAAGTAACAGTATCAAATATTTTACCCAGgcatggaacatctggtgtgaaaacaaaggtctggaattga 1899 0.2475 MATKALITIQSFLGFMTVFTMASAQSPNYMNDDCHNSTTQQALTLTYQTNLHNTLLWLSSDAATSKGYNHTTTGNGTVDAVYGLYDCRGDVTGSFCQFCVSTAASEILQRCPNRSSAVIWYNYCILRYSNHNFFGNLTTTPSWQIVGSKNTTNPEELQKSEDYMQSLRREATVETNKLYAMGGFNLSNGEERYGLVQCSRDLTNVECSQCLEAMLVKVPQCCAANLGWQVLAPSCLIKYDDYMFYQITNQTSSLLPNPAKKGGKIKSTTLIIIIVSVLVALALVVCSIYYLWRQYLSNKDGLLSVNTPTSFHGHVQREDALTVDLPTIPLIWIRQSTNNFSELDKLGEGGFGPVYKGNLEDGTEIAVKRLSKTSGQGLEEFKNEVIFIAKLQHRNLVRLLGCCIEENEKLLVYEYMPNSSLDSHLFNKEKRKQLDWKLRLSIINGIAKGLLYLHEDSRLRVIHRDLKASNVLLDQDMNPKISDFGLARTFEKGQSQENTKRVMGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGKRNSGFYLSEHGQSLLVYSWRLWCEGKSLELLDQILEKTYKTSEVMRCIHIVGRQTKEEESTSKTSKDPSVNEVTVSNILPRHGTSGVKTKVWN 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02769 632 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Gma06g02769 632 Gene3D Phosphorylase Kinase; domain 1 307 415 - -
Gma06g02769 632 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Gma06g02769 632 Pfam Salt stress response/antifungal 158 242 IPR002902 -
Gma06g02769 632 ProSiteProfiles Protein kinase domain profile. 340 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02769 632 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 589 - -
Gma06g02769 632 Gene3D Transferase(Phosphotransferase) domain 1 416 614 - -
Gma06g02769 632 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Gma06g02769 632 SUPERFAMILY Protein kinase-like (PK-like) 323 585 IPR011009 -
Gma06g02769 632 CDD STKc_IRAK 346 612 - -
Gma06g02769 632 Gene3D - 140 244 IPR038408 -
Gma06g02769 632 Gene3D - 26 133 IPR038408 -
Gma06g02769 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Gma06g02769 632 Pfam Protein tyrosine and serine/threonine kinase 344 540 IPR001245 GO:0004672|GO:0006468
Gma06g02769 632 PANTHER PROTEIN KINASE DOMAIN 19 589 - -
Gma06g02769 632 SMART serkin_6 340 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02769 Gma-Chr6 51501048 51511414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02769 4 621 Receptor kinase-like Gene Family AT4G05200 42.790 5.95e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma06g02769 PK_Tyr_Ser-Thr 8.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02769 - - lja:Lj0g3v0351729.1 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02769 06 51501048 51511414 Gma06g02769 06 51501048 51511414 ECH