Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02757 CAAGAAAAGAGCTTCCGCATATGCTGTAACTGTTTGGTGAAGCAGAGCCAGGATGAGGTGGTTGACGAGGTTACCTGGAAGATATCTCCTGTCAATGAGAGGCTCCAGGCGGTTTCGAAATACACGCCGGAAGTGATTAAAGCCTTGGCCGCCTCTTCCAAAATCAACTTGTCGCCAATTCGCAGCAGCGGCAACAAGGAGACTTGTCTTGATAAGGTTATTACTTCGCCGACTCCCAAGGTGCCATTGAGCTTCAAAAGGATAAGCTCGGCCCGCGATGTGAGTGGACAGAGCCCCTTCAGAACTCCACCATCGTATCGCCCTGACAAGGTGCAGCGTGTCAAGGATATTGAACGCATCAGACCATGCGACAATCTTTTATTAAGGCAGAACAAAAAGGCATTGCTTGAACTGTTAGATCAAGTTGAGGATGCCATTGCTGTTGATGATGTTACAGTTTGTAATAACAACACTTATTCCTTTAAAGTTCCGCAAGATCTAATTGCTAATGAGCTTCCTGTCAAAGTCAATCCTACAGTAGAAAGGACTAAATCAGATATACCTAAAGAGGTTGTTGATGTCTTCAGTTCTAATTATTTGGTTTTGGAGGTATCTGAACTTAGGTCTGCTGATTCATCTGATGCCCCATGCTCATCATACAAGGTGCTTCGTTTGCTAAATGAACAAACCGGAGAAGAGAGGGCTGTAAACCTTCATAATGAGTGGTTTGATAGTGTAATTGCACCTGGAGATACTGTGCACATAATCGGTCAATTCGACCTGGGGGGAAATTGTGATATTGATCACAATAAAAACTTTTTGATTGTACACCCAGATATTCTAGTGTCTGGAACACGGGTAGTTGCTGCCAGTTTAAGTTGCCCAAGGAGAACTGTCTTAGACGAGAGGTTAAAAAACAATGATTACTCAATTATAGCATTAACTGGAACGCTGCTGCACCAAATTTTTCAGGCTGGGCTTACGAAAGAAAATCCTACAGTAAATTTCATGGAAGATTATGCAGAAGTGGTATTACAGAGAAACATTGAAAGTTTGTATGCATGTGGAGTAAATGAAAATGATGTTCGCAAAACCTTGAGAGATGCTATTCCTAGAATATTGAGTTGGATCAAGCAGTTCAAAAATACGAAGGAAAGAAAAGACCTCAGTGTCAATTTTGGATTTGATGACGAGCCAAAGAATGTAATTGATATTGAAGAGATGGCTTGGGCTCCAAAATATGGTTTGAAAGGAATGATTGATGCTTCAGTCAGAGTGAAAATTCAATCACAAAAAGATGATCCGGAGGAAAAGATCATGCCATTAGAGTTCAAAACTGGAAAAGCACCATACAGCCAGGCAAGTTCTGTAGAGCACAGGGCCCAAGTAATTTTGTACACTCTCCTAATGTCTGAAAGGTATCAGAAGGCTGTTGATTCTGGTCTTCTATACTATCTCCGATCCGACCAGACACAGGGTATTGTGGTTCAAAGATCTGACTTAACTGGGCTTATAATGCGGCGAAATGAACTAGCAAGTGATCTTCTTAAGGCATTAACTTTGCAACAACTGCCTCCAATGTTACAGAGTCCTAGCATTTGCAAAGGTTGTCGCCATCTTAATGTGTGTAGCATTTATCATAAGGCACATGGTGGAAGCACAGAGAGCAGTGGGTTGGGAGAAGCTTTTGATTCTCTTAGTAATCACATGACATCTTCACATTCTAAGTTTCTCTGCCGTTGGGATCGCTTGATTGACTTAGAAGCTAAAGAGACTGAGCTTTTAAAGAAAGGGGTGTTGCAATCACATAGATTAAACAGTGGTGGCCTTTCTTCTATTGTTCTTGATGCTTCACAAGGAATACCTCATCAGAAATCTCTCAATGATAATAAATTCGTTTATCATTTCATACAACAAGATTCTTCTTCTAGCCTCTCTGGAGTTTTTGATGCGTCTTCTAGTGCCTCGTTGAAAAATGATTTAGATTTCACACTTAGAAGTGGAGATCATGTGATACTGAGTAATCAATCTAGCCATCAAATTATTGCTAAAGGGGTGATATCTGATATTAGTCCGATCCATGTATCTGTTTCCTTTTCCAAGCGTTTACGAATTCCTGGGAGTTCTTCCACTGCACATGATCTCAGTCAGCAGGTTTGGAGAATTGATAAGGATGAATATGTGACTTCATTTGCTATTATGAGGTTTAATCTTGTACAGCTTTTTCTACAAAATGATCAAAGTGCTCATCTGCGGAGGATGATTGTTGATCTTGAGGCTCCTAGATTTGACAGTGGATCTTTAGTTAGTCAGGATCCAGCGATATCCTATGTTTGGTCAGAGAAGAGTTTGAATGATGACCAACGTGGAGCAATTCTCAAGATACTTACAGCAAAAGATTATGCACTTATATTAGGGATGCCTGGAACAGGGAAAACATCCACATTGGTCCATGCTGTGAAAGCCTTGTTGATTAGAGGGACATCCATTTTGCTAACTGCGTATACAAATTCTGCTGTCGATAATTTACTCATCAAATTAAAAGCACAGGGGATTGATTTTGTACGAATTGGAAGACATGAAGTAGTGAATGAGGAGGTTAGAGAACACTGCCTCTCAGCAATGAATGTACAAGGTGTTGAAGATATCAAAATAAGGTTGGAACAAGTCAAAGTTGTTGCAGTTACTTGTCTCGGCATTTCTAGTCCCTTGCTTGCCAACACGAGGTTTGATGTATGCATTATGGATGAAGCTGGACAGACAACTCTACCAGTGTCCTTGGGTCCTCTAATATTTGCTTCGACGTTTGTACTTGTTGGGGATCATTATCAACTACCACCACTTGTTCAGAGTGCAGAGGCCCGAGAGAATGGCATGGGCATAAGTTTGTTCTGTAGGCTCTCAGAAGCACATCCAGAGGCTATTTCAGCTTTGCAGAGTCAGTATCGAATGTGTCAGGACATTATGGACCTTTCCAATGCCTTGATATATGGTGACAGATTGAGGTGTGGTTCATTTGAGGTAGCTAACTCAAAACTTGAGTTTTCAGGCTTAAACTGTGATTTGCCTTGGCTAGAAGATGTTTTGAATCCTCGAAGACCTGTTATATTTATTGACACTGACAAGTTGCCTGCTTTAGAGGCAAGAGATCAGAAGATTGTAAATAACCCTATTGAAGCTCAGATAATTGCTGAGGTTGCAAAGGAATTGGTAAAGAATGGAATCGGAAGTGAACACATTGGCATTATTACTCCCTATAATTCACAGGCAAACCTCATCCGGAATGCTGCTTCCATGACTTCCTTGGAGATACATACCATAGACAAATACCAGGGTAGAGATAAAGACTGTATATTAGTATCTTTTGTAAGGTCTACCGAAAACCCGACAAGCTGTGCTGCTTCTCTGCTTGGAGACTGGCACAGGATAAATGTGGCTCTTACTCGCGCTAAGAAAAAGTTGATCATGGTTGGATCTCGGAGAACTCTTCTTAGGGTTCCTCTATTGAAACTTCTCATTAAGAAGGTTGAGGAACAATCTGGAATTTTAACTGTGACTAAGAAGGATATCTATCGAAAAAGTGAGCTCAAGAGATGTTCTCAAATGAGATGA 3612 0.4092 QEKSFRICCNCLVKQSQDEVVDEVTWKISPVNERLQAVSKYTPEVIKALAASSKINLSPIRSSGNKETCLDKVITSPTPKVPLSFKRISSARDVSGQSPFRTPPSYRPDKVQRVKDIERIRPCDNLLLRQNKKALLELLDQVEDAIAVDDVTVCNNNTYSFKVPQDLIANELPVKVNPTVERTKSDIPKEVVDVFSSNYLVLEVSELRSADSSDAPCSSYKVLRLLNEQTGEERAVNLHNEWFDSVIAPGDTVHIIGQFDLGGNCDIDHNKNFLIVHPDILVSGTRVVAASLSCPRRTVLDERLKNNDYSIIALTGTLLHQIFQAGLTKENPTVNFMEDYAEVVLQRNIESLYACGVNENDVRKTLRDAIPRILSWIKQFKNTKERKDLSVNFGFDDEPKNVIDIEEMAWAPKYGLKGMIDASVRVKIQSQKDDPEEKIMPLEFKTGKAPYSQASSVEHRAQVILYTLLMSERYQKAVDSGLLYYLRSDQTQGIVVQRSDLTGLIMRRNELASDLLKALTLQQLPPMLQSPSICKGCRHLNVCSIYHKAHGGSTESSGLGEAFDSLSNHMTSSHSKFLCRWDRLIDLEAKETELLKKGVLQSHRLNSGGLSSIVLDASQGIPHQKSLNDNKFVYHFIQQDSSSSLSGVFDASSSASLKNDLDFTLRSGDHVILSNQSSHQIIAKGVISDISPIHVSVSFSKRLRIPGSSSTAHDLSQQVWRIDKDEYVTSFAIMRFNLVQLFLQNDQSAHLRRMIVDLEAPRFDSGSLVSQDPAISYVWSEKSLNDDQRGAILKILTAKDYALILGMPGTGKTSTLVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRHEVVNEEVREHCLSAMNVQGVEDIKIRLEQVKVVAVTCLGISSPLLANTRFDVCIMDEAGQTTLPVSLGPLIFASTFVLVGDHYQLPPLVQSAEARENGMGISLFCRLSEAHPEAISALQSQYRMCQDIMDLSNALIYGDRLRCGSFEVANSKLEFSGLNCDLPWLEDVLNPRRPVIFIDTDKLPALEARDQKIVNNPIEAQIIAEVAKELVKNGIGSEHIGIITPYNSQANLIRNAASMTSLEIHTIDKYQGRDKDCILVSFVRSTENPTSCAASLLGDWHRINVALTRAKKKLIMVGSRRTLLRVPLLKLLIKKVEEQSGILTVTKKDIYRKSELKRCSQMR 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02757 1203 CDD SF1_C_Upf1 984 1162 IPR041679 -
Gma06g02757 1203 Gene3D - 283 544 IPR011604 -
Gma06g02757 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 783 1168 IPR027417 -
Gma06g02757 1203 Pfam DNA replication factor Dna2 228 426 IPR014808 -
Gma06g02757 1203 Gene3D - 982 1190 IPR027417 -
Gma06g02757 1203 Pfam AAA domain 961 1160 IPR041679 -
Gma06g02757 1203 CDD DEXXQc_DNA2 783 983 - -
Gma06g02757 1203 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2 65 1178 IPR026851 GO:0017108|GO:0017116|GO:0033567
Gma06g02757 1203 PANTHER DNA2/NAM7 HELICASE FAMILY 65 1178 IPR045055 -
Gma06g02757 1203 Pfam AAA domain 887 951 IPR041677 GO:0004386
Gma06g02757 1203 Pfam AAA domain 784 875 IPR041677 GO:0004386
Gma06g02757 1203 Gene3D - 709 981 IPR027417 -
Gma06g02757 1203 Pfam Domain of unknown function DUF83 435 544 IPR022765 -
Gma06g02757 1203 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02757 Gma-Chr6 51342672 51369446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02757 6 925 Core DNA Replication Machinery Family AT1G08840 55.941 0.0 1009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02757 K10742 - gmx:100799415 2288.46