Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02731 ATGGTTAGAGGTGGTGGACTCCAATCCATGGATTCAGATCCAATTGGGAGCTTCTTCCTCCACAAGCCAATTGTTCTCAACTCTTTCCCAGCTGAAGACACAAACAACAAGTGGAAAAAACTTAGTCTCCACCACAACATGGATGCCACAGCTAGCAATACCAAAGATAACACCATCCCCTTTCAAGTCAGCCTTAGATGTTCTCCAAACAATCATGATGATGCCTCTTCACCACCATCTCTCCACAACAACAGAACCGAGATGGACTTATTCTCCGACAAGAATAGTACCAAAGATGATGACAACAACAACAACAAGGTTGATGCTTCTGCCTCTCTCCCCGACAATGATCATCATTCCACCACTCCACCCACGTTGGAATTCAAACTAAACACTGGTGGTCTAAATCTTCTTACTACCAACACTAACAGTGACCAATCTATGGTGGATGATGAGATATCACCCAATTCAGAAGACAAAAGAGCTAAGAATGAGATGGCTGTTCTTCAAGCTGATCTTGAAAGAATGAAGAGGGAGAATCAAAAGTTGAGGGACTCGCTTGATGAGGTTACCACCAATTACAGCGCGCTTCAGATGCATTTTATGAATCTGATGCAAGAGCGAAAGGGAGAGGAAGGTGAAGAAGAACAAGAAGAAGTGTATGGTGGAGAGAAGAAGCAGCAATTAGGTGAGAGTGGTGGTGATGGGATATTAGTTCCAAGGCAGTTTATGGATCTTGGGTTGGCTGCTAATAATGGTACTAGCACTGGTATTGAACCCTCTTCTTCATCAGGAGGAAGAAGCCAAGATCGATCAAGATCACCCAACGTAGAAGTGGCTTCCAAGGAATTAGGGACAAATGATGAAGAAGAGAAGAAAGAGTATGGTAGAGGGATAGAGAGAGAGGATGATAGTCCCTCAGGGCATGCTCATAAAGTTCCAAGGTTCAGTCCTCCAAAGGATAATAATAGTGTTGAGGCTGAGGCTACTATGAGGAAGGCAAGAGTTTCTGTTAGAGCTCGATCAGAGACACCCATGATTGCTGATGGGTGTCAATGGAGAAAGTATGGGCAGAAAATGGCCAAAGGAAACCCATGTCCTAGAGCTTATTATAGGTGTAGCATGGCATCGGCTTGCCCAGTTAGAAAACAGGTACAAAGGTGTGCTGAAGATAGAACAGTCCTTATCACAACCTATGAAGGAAATCACAACCACCCTTTGCCTCCAACAGCCATGGCAATGGCACAAACCACATCCTCAGCAGCAAGAATGCTGCTTTCTGGATCAATGTCAAGTGCTGACAGCATAATGAATGCAAACTTCCTCACAGGGACACTCCTTCCTTGCTCTTCAAGCATGGCCACTATCTCAGCATCTGCTCCATTCCCAACTGTTACATTAGACCTAACTCATTCTCCAAACCCTCTACAGTTCCCAAGGCAGCAGCATCCAAACCAGTTGCAGATTGGTGTCCCTCAGAATAATTTTGCAAACTCCCCGGCAGCATCTTTACTGCCTCAGATATTTGGACAAGCACTGTATAACAACCAATCAAAGTTTTCTGGCCTACAAATGTCATCATCACATTATGATGCAGACCCTTCTTCACAATTTGcattggcagcagctatcacttccattattggtgGAAAGCGTTACTATTTGACATAG 1671 0.4339 MVRGGGLQSMDSDPIGSFFLHKPIVLNSFPAEDTNNKWKKLSLHHNMDATASNTKDNTIPFQVSLRCSPNNHDDASSPPSLHNNRTEMDLFSDKNSTKDDDNNNNKVDASASLPDNDHHSTTPPTLEFKLNTGGLNLLTTNTNSDQSMVDDEISPNSEDKRAKNEMAVLQADLERMKRENQKLRDSLDEVTTNYSALQMHFMNLMQERKGEEGEEEQEEVYGGEKKQQLGESGGDGILVPRQFMDLGLAANNGTSTGIEPSSSSGGRSQDRSRSPNVEVASKELGTNDEEEKKEYGRGIEREDDSPSGHAHKVPRFSPPKDNNSVEAEATMRKARVSVRARSETPMIADGCQWRKYGQKMAKGNPCPRAYYRCSMASACPVRKQVQRCAEDRTVLITTYEGNHNHPLPPTAMAMAQTTSSAARMLLSGSMSSADSIMNANFLTGTLLPCSSSMATISASAPFPTVTLDLTHSPNPLQFPRQQHPNQLQIGVPQNNFANSPAASLLPQIFGQALYNNQSKFSGLQMSSSHYDADPSSQFALAAAITSIIGGKRYYLT 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02731 556 MobiDBLite consensus disorder prediction 63 86 - -
Gma06g02731 556 MobiDBLite consensus disorder prediction 87 105 - -
Gma06g02731 556 SUPERFAMILY WRKY DNA-binding domain 340 408 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g02731 556 Gene3D WRKY domain 332 409 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma06g02731 556 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 55 550 IPR044810 GO:0003700
Gma06g02731 556 MobiDBLite consensus disorder prediction 106 151 - -
Gma06g02731 556 MobiDBLite consensus disorder prediction 283 316 - -
Gma06g02731 556 SMART WRKY_cls 347 407 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02731 556 MobiDBLite consensus disorder prediction 63 161 - -
Gma06g02731 556 PANTHER OS05G0567200 PROTEIN 55 550 - -
Gma06g02731 556 ProSiteProfiles WRKY domain profile. 342 408 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02731 556 Coils Coil 159 193 - -
Gma06g02731 556 Pfam WRKY DNA -binding domain 349 406 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma06g02731 556 MobiDBLite consensus disorder prediction 248 281 - -
Gma06g02731 556 MobiDBLite consensus disorder prediction 207 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02731 Gma-Chr6 51097118 51100456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02731 61 554 WRKY Transcription Factor Family AT1G62300 47.081 3.54e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma06g02731 WRKY 1.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02731 - - gmx:100795177 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02731 06 51097118 51100456 Gma06g02731 06 51097118 51100456 ECH
Gma06g02731 06 51097118 51100456 Gma15g01036 15 8727729 8730417 ECH
Gma06g02731 06 51097118 51100456 Gma07g02529 07 47619028 47622264 ECH
Gma12g00867 12 8420446 8423957 Gma06g02731 06 51097118 51100456 GST
Gma13g02744 13 42051388 42054331 Gma06g02731 06 51097118 51100456 PCT
Gma06g02731 06 51097118 51100456 Gma13g02744 13 42051388 42054331 PCT