Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02722 ATGGTTGAACGGAAGCAGTTCAAGACGAAGCTATGCGTTCTGTATCAGAGAGGTCGCTGCAATCGCCATAATTGCTCCTTCGCGCATGGGAGTGCCGAGCTTCGACGATTCTCTGCCTCGTATAGTGGGAGGAGAGACTATTTAGATAATGACTTGAGGGATAaacttgacagaaggcatgtatctcctcgaaggtactcaccaactccagatactagaggccgccagatcatccgtgAATACAGTCCTACAAGATCTTTGGAGAAAAAAAGTGACAGGAGATATAGGAGAAAACAGGATATTACTGGCCAAAGTGATGTTTCTGGAAATTTGAAAGTCTCAGATAGAGTTCAAGATCGAGTTAAAGAAGGAAAATTGCTTTCCTCTGGTTCTAGGAATAATCTTGAGGAGAAgctgaagaaagtagattcagatatcagcactcttcagaaccgaaaattccagctagagGTCTTCCTTGATGAGAATGTTCAAGAAGTGGATAGTCTTAATTCTAGAATTCGGGAACTTGAAGGTCAATTATCCAAAGAGGATGAGGAGTGCAAAAGAATTACTTCAAGAGTAAGGAAATTTGTAAGAGTGCACAATCATATGTCAGAGTTACAAGATGAACTGAAGAGATCACAAGTCCGACTTCAAAGGTTTGGAGATCAGCTTTTCTCAGACATTTCTAGAATTGGTGCCAATGAAGAAGATTTAAGCATTGATATTTTAAGCAATGGTGAAAATACTGGTCTTCATCCAATCGCTAAACATAATGTGGAGCAGAATGATGCATCTTTCCACAGAAGAAGGCTGCATATTGAATGTGATGCTTTGGAAGAGTTGAAACAAGATAGATCAAAAGATGGGCATTTGGTTGAGACAGCTAGAACTAGGAAGCGTTCTCGCTGGAATTTATCTGATCAATTGAATGAGGACTCTCTTGGTACTCCAGACAATGGAACTGAAGTTACTAGATCTCTAGATCTTGAAGGCAAGCACAAGAAAGGATTGAAGCAACCCAGGATTGAAGCGCCATCAACCAGCATGGCAGCTCATGTGGTTGATGAGGACGTTGATATTGAACGTTATGATGGAAATGATATCTATGAAACTGCAAATACGGAAAATTATAATGGAGCGGCATATAAGGTGAAGGGTGCGCCACTTATGCTTCCCCCAGCTTTGATACCTCGTAGCAATTATTCGCAGTATGAGGGTAACGACGAGAATGTTGATGTGGATGGTTGA 1254 0.3644 MVERKQFKTKLCVLYQRGRCNRHNCSFAHGSAELRRFSASYSGRRDYLDNDLRDKLDRRHVSPRRYSPTPDTRGRQIIREYSPTRSLEKKSDRRYRRKQDITGQSDVSGNLKVSDRVQDRVKEGKLLSSGSRNNLEEKLKKVDSDISTLQNRKFQLEVFLDENVQEVDSLNSRIRELEGQLSKEDEECKRITSRVRKFVRVHNHMSELQDELKRSQVRLQRFGDQLFSDISRIGANEEDLSIDILSNGENTGLHPIAKHNVEQNDASFHRRRLHIECDALEELKQDRSKDGHLVETARTRKRSRWNLSDQLNEDSLGTPDNGTEVTRSLDLEGKHKKGLKQPRIEAPSTSMAAHVVDEDVDIERYDGNDIYETANTENYNGAAYKVKGAPLMLPPALIPRSNYSQYEGNDENVDVDG 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02722 417 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 416 IPR045868 GO:0046872
Gma06g02722 417 Coils Coil 160 194 - -
Gma06g02722 417 Gene3D - 1 36 - -
Gma06g02722 417 MobiDBLite consensus disorder prediction 84 115 - -
Gma06g02722 417 MobiDBLite consensus disorder prediction 84 101 - -
Gma06g02722 417 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 416 - -
Gma06g02722 417 Coils Coil 132 152 - -
Gma06g02722 417 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Gma06g02722 417 Coils Coil 205 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02722 Gma-Chr6 51023572 51032345 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma06g02722 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02722 - - gmx:100793596 820.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02722 06 51023572 51032345 Gma06g02722 06 51023572 51032345 ECH