Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02689 ATGGAATTGATAAGACTCAGTTATGCGGTTGTTTATGTCATTCTCCTTTGTGCGTTGGCCCAAGGGGGCTCAGAAGGGAAGGGGGGGAAGGAAGAGGAGATTTCTAGAGATGGTGGAGAAGCTTTCTCATCTTCCATTAATTATGTGCATGGAATTAATAAGGTAGAAAATGAATTGAAACATTGCAGGAAAGAATTGATAGAGAGGAACAATGATGTCAAAACTAGTACTTCTCCTCCTGCTCCTGTTTCAGAAAAGGGTAGCTCTAGATATTTATTGCCAAAGCATTCTAGATCAACCTTGGGTGTGGAAAGTGCTCATGGCAGAAATTTGATTGCTGATTCACCACATAATGCACCAAGTCCTTCTGCTACTACTGCTGAACCACCAAGTCATGGTCCAACACCAACAAGTTctccatcatcaccaactccatcatcaccgtctcaatcatcaccaactccaAGTCCAAAAGGTGTGGATTTACCACTCCCTCCAGATATGTTTGTGCCACTTCCACCATCACCCCGTGCACCTCATCCTCCTCCTCAGAATTTTCGACCTATAGTAGATGCTCCTGTTGCTTCATCACCTAACAATGAAAACAAAAAGAAGCAAACAATTATTTTAGCTGCCTCTTTATCAGGAATTATTATCTTGATAGGCTTGGCCCTCTGCTATCGCGAGGCCAGAGGCAACAAAGGTGACAGAGATGACAGGCCCTTGTTGGTATTAACCTCAAGTGACTATTCTGGTGGTTCAAAGAAGGTTGTTCGATTGGGAGATGCTGACAAGGAAGAATCTGACATTGACAATGGAAAGAAACCTTCTAATTTTAGAAATTGGTCCATTAAGGGTGGACATAACAATGCCTCACTGGTTGAGACAACAGCATCAGAAGGTGTAGGACAAGTTCTCAAAGGAAAGCCTGCCCCTCCACCTCCACCTCTACCTCCTGGACCACCACCACCATCAGCTCCAAAGCCGCCACCGCCTCCTGCTCCTCGTGCACCGCCACCTCCAAAAGGTGCTCATCCTCCACCTGCTCCTCCCAAACCATTGGGAGGTAAAAATCAAGGTCCATTACTTGCTAAAGAAGGAACTTCAAGTGACGGTGATGCTCCAAAACCAAAACTAAAGCCATTTTTCTGGGATAAGGTTAATGCAAAACCTGACCAATCAATGGTGTGGCATGAGATCAGTGCAGGATCATTTGTGATCAATGAGGAAATGATGGAGTCTTTGTTTGGCTGCACCAACCAGAATAAAAATGAACCTAAAAAAAATTCACTACATGTAGATACTTCAGTGCAATATATTCAGATTATTGACCCAAAGAAAGCGCAGAACTTATCAATTCTTTTGCGAGCTCTGAATGTGACAACAGAAGAAGTTATTGATGCTCTTAAAGAAGGTAATGAGATTCCTGTGGAGCTCATCCAAACATTGTTGAAGATGGCACCTACAACAGATGAGGAACTGAAGCTAAGGCTATTCAATGGACAACTCTCAGAACTAGGCCCGGCAGAGAGGTTTCTCAAAGTGTTGGTTGACATTCCATTCGCTTTCAAACGTCTTGAATCTCTCAAGTTCATGTTTATGCTTAAAGAAGACTTCTCAAGCATTAAGGACTCCTTTGCCACATTAGAGGTTGCATGCGACGAACTCAGAAAAAGCAGGCTATTCCTGAAACTCCTCGAAGCAGTTCTCAAAACCGGCAACCGCATGAACGACGGAACCTACCGCGGAGGCGCGCAGGCGTTCAGGCTCGACACCCTCCTCAAACTCTCCGACGTAAAAGGAACAGACAGCAAGACAACACTCTTGCACTTCGTGGTTCAAGAAATCATCCGCTCCGAGGGAATAAGAGCGGCGCGAACAGAAAGAGCAGGAAGAAGCATCTCCAGCGTCGGAACCAACAATGATTCCGACGAAGGAGGAGCCGAGGAGTCCGAGGAGCACTACCGCAGCCTCGGACTCCAGGTAATCTCCGGGCTCAGCAATGAGCTCGGAGACGTGAAGAAGGCCGCGCTTATAGACGGTGATGCACTCAGCAGCACCGTCTTAAAGCTCGGCCACTCAATGGTGAAGACTCAAGAATTCTTGGACAATGACATGAAGAACATTGAGGAAGAGAGCGAGTTCCAGCATTGCATGGAGAGCTTCATGGAGAAAGCGAGGGAGGAAGTGACGTGGCTGGTGAATGAAGAGAAGAGGATAATGGCTTTGGTTAAGAGCACTGCGGACTACTTTCACGGGAATGCCGGGAAGGACGAAGGCTTGCGTTTGTTCTTGATCGTGCGTGATTTCTTGATCATATTGGACAAGGTTTGCAGCGAGGTGAGGGAATCTACCATGAAGATAGCCAAAGCTGCAAGCAATAGCGCCAAAGAGGCAGCGAGGAGTTCGGTTTCTTCGTCGCAAAACTCGCCAACTCCATCGACGTCCGATATGCATAGAAGGCTGTTTCCGGCGATCGCCGAGAGGAGAATGGATTACTCCAGTTCTGATGAGGATGAGGACTTCTAA 2529 0.4555 MELIRLSYAVVYVILLCALAQGGSEGKGGKEEEISRDGGEAFSSSINYVHGINKVENELKHCRKELIERNNDVKTSTSPPAPVSEKGSSRYLLPKHSRSTLGVESAHGRNLIADSPHNAPSPSATTAEPPSHGPTPTSSPSSPTPSSPSQSSPTPSPKGVDLPLPPDMFVPLPPSPRAPHPPPQNFRPIVDAPVASSPNNENKKKQTIILAASLSGIIILIGLALCYREARGNKGDRDDRPLLVLTSSDYSGGSKKVVRLGDADKEESDIDNGKKPSNFRNWSIKGGHNNASLVETTASEGVGQVLKGKPAPPPPPLPPGPPPPSAPKPPPPPAPRAPPPPKGAHPPPAPPKPLGGKNQGPLLAKEGTSSDGDAPKPKLKPFFWDKVNAKPDQSMVWHEISAGSFVINEEMMESLFGCTNQNKNEPKKNSLHVDTSVQYIQIIDPKKAQNLSILLRALNVTTEEVIDALKEGNEIPVELIQTLLKMAPTTDEELKLRLFNGQLSELGPAERFLKVLVDIPFAFKRLESLKFMFMLKEDFSSIKDSFATLEVACDELRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDSKTTLLHFVVQEIIRSEGIRAARTERAGRSISSVGTNNDSDEGGAEESEEHYRSLGLQVISGLSNELGDVKKAALIDGDALSSTVLKLGHSMVKTQEFLDNDMKNIEEESEFQHCMESFMEKAREEVTWLVNEEKRIMALVKSTADYFHGNAGKDEGLRLFLIVRDFLIILDKVCSEVRESTMKIAKAASNSAKEAARSSVSSSQNSPTPSTSDMHRRLFPAIAERRMDYSSSDEDEDF 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02689 842 MobiDBLite consensus disorder prediction 793 817 - -
Gma06g02689 842 Gene3D Formin, FH2 domain 375 810 IPR042201 -
Gma06g02689 842 MobiDBLite consensus disorder prediction 629 651 - -
Gma06g02689 842 Coils Coil 52 72 - -
Gma06g02689 842 MobiDBLite consensus disorder prediction 248 285 - -
Gma06g02689 842 MobiDBLite consensus disorder prediction 258 274 - -
Gma06g02689 842 PANTHER FORMIN-RELATED 1 840 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gma06g02689 842 SMART it6_source 369 789 IPR015425 -
Gma06g02689 842 MobiDBLite consensus disorder prediction 308 355 - -
Gma06g02689 842 MobiDBLite consensus disorder prediction 70 201 - -
Gma06g02689 842 PANTHER FORMIN-LIKE PROTEIN 1 840 - -
Gma06g02689 842 PRINTS Proline rich extensin signature 128 140 - -
Gma06g02689 842 PRINTS Proline rich extensin signature 143 159 - -
Gma06g02689 842 PRINTS Proline rich extensin signature 164 176 - -
Gma06g02689 842 PRINTS Proline rich extensin signature 177 198 - -
Gma06g02689 842 PRINTS Proline rich extensin signature 312 337 - -
Gma06g02689 842 MobiDBLite consensus disorder prediction 304 377 - -
Gma06g02689 842 MobiDBLite consensus disorder prediction 127 188 - -
Gma06g02689 842 Pfam Formin Homology 2 Domain 373 774 IPR015425 -
Gma06g02689 842 ProSiteProfiles Formin homology-2 (FH2) domain profile. 369 800 IPR015425 -
Gma06g02689 842 SUPERFAMILY Formin homology 2 domain (FH2 domain) 438 791 - -
Gma06g02689 842 MobiDBLite consensus disorder prediction 793 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02689 Gma-Chr6 50541488 50546715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02689 371 804 FH2 protein (formin) Gene Family AT5G67470 46.727 3.61e-120 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02689 - - gmx:100780844 927.161