Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02681 ATGAACAAGTGCGAACTGTGCAAAGTTCCGGCGAGGATCTTCTGCGAGTCGGACCAGGCGAGCTTATGCTGGGACTGCGACGCTAAGGTTCACAGCGCCAACTTCTTGGTCGCGAGACACGCGCGAACCTTACTCTGCCGCACGTGCCGCTCTCCCACGCCGTGGAAGGCCTCCGGCGCCTCACTCGCCAGCGCCGTCTCCGTCTGCGACCGCTGCGCCGCCTCCGAAGAACCGGAAGAGAGTGAAGCCGGCAATGACGACGAACCAGACACGGAGGACGACGACAACGACGACGAGGACGGCGACAATCAGGTCGTGCCGTGGTCCTCCTCCCCGCCGCCGCCTCCGCCGTCGAGCTCCTCCGGCAGCGAATGGTCGGAGTGCAAAAACGACGACGCTTCTATTTCCGCCTCGGAACAGGAAACGACAACATGCTCGTTGAAACGACAGCGCGAGGACGATGATGATGCTTCTTCCGATCGTGATCCCAGGGTGTTGAGAAGGGTTGGGCGTCTCAACGGAGGTTGCGTGTGA 534 0.6199 MNKCELCKVPARIFCESDQASLCWDCDAKVHSANFLVARHARTLLCRTCRSPTPWKASGASLASAVSVCDRCAASEEPEESEAGNDDEPDTEDDDNDDEDGDNQVVPWSSSPPPPPPSSSSGSEWSECKNDDASISASEQETTTCSLKRQREDDDDASSDRDPRVLRRVGRLNGGCV 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02681 177 MobiDBLite consensus disorder prediction 73 177 - -
Gma06g02681 177 MobiDBLite consensus disorder prediction 79 102 - -
Gma06g02681 177 Pfam B-box zinc finger 2 41 IPR000315 GO:0008270
Gma06g02681 177 MobiDBLite consensus disorder prediction 121 144 - -
Gma06g02681 177 MobiDBLite consensus disorder prediction 145 168 - -
Gma06g02681 177 PANTHER - 1 160 - -
Gma06g02681 177 CDD Bbox1_BBX-like 3 45 - -
Gma06g02681 177 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 160 - -
Gma06g02681 177 SMART bboxneu5 1 45 IPR000315 GO:0008270
Gma06g02681 177 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02681 Gma-Chr6 50455554 50456718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02681 3 115 C2C2-CO-like Transcription Factor Family AT5G54470 47.328 9.35e-33 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma06g02681 zf-B_box 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02681 - - gmx:100782655 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g00927 12 9453183 9453785 Gma06g02681 06 50455554 50456718 GST
Gma13g02686 13 41569942 41571540 Gma06g02681 06 50455554 50456718 PCT
Gma12g01872 12 39373757 39375163 Gma06g02681 06 50455554 50456718 PCT
Gma06g02681 06 50455554 50456718 Gma13g02686 13 41569942 41571540 PCT
Gma06g02681 06 50455554 50456718 Gma12g01872 12 39373757 39375163 PCT