Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02676 ATGGTGAGAACCCCGTCTTGTGACAAAAGTGGAATGAGGAAAGGTACTTGGACTCCAGAGGAAGATATGAAGTTAATTGCTTATGTCACtaggtatggctgctggaattggcgccaactccccaagtttgcagGTCTTGCAAGATGTGGGAAAAGTTGTAGATTGAGATGGATGAATTATCTAAGGCCTAATATCAAAAGAGGGAACTTCACTCAACAGGAAGAAGAATGCATCATCAGAATGCACAAAAAACTTGGTAACAGATGGTCCTTGATTGCTGAAAAGCTTCCTGGAAGAACAGACAATGAGGTCAAGAACTATTGGCATGGCCATCTTAAGAAGATAAAAAGCAATGAGATCACTACATCAAAGTTGAAGTCCAAGCCAGGCTATAAAAGCTCATTGGCCATGTCCAGGGAAAGTACCTCAGAAGGAGACAACTATTCCCTTACCTCTATTGTTTCACTATCAACCATGGATAGTTCCTTATCAAAAGAAGAATCTGTTCCTCCATTGGTATCTTACGAAGAATTCAGCAGCGATTTTTGGACTGAACCATTCCTCACAGAAGATACGTTTACTAATGAGATATGTAGTGGTGAAGGCATAGCATTACTAATTCCAAATTTTGATGGTGCATATCTGTTGTAG 651 0.3687 MVRTPSCDKSGMRKGTWTPEEDMKLIAYVTRYGCWNWRQLPKFAGLARCGKSCRLRWMNYLRPNIKRGNFTQQEEECIIRMHKKLGNRWSLIAEKLPGRTDNEVKNYWHGHLKKIKSNEITTSKLKSKPGYKSSLAMSRESTSEGDNYSLTSIVSLSTMDSSLSKEESVPPLVSYEEFSSDFWTEPFLTEDTFTNEICSGEGIALLIPNFDGAYLL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02676 216 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gma06g02676 216 SMART sant 66 114 IPR001005 -
Gma06g02676 216 SMART sant 13 63 IPR001005 -
Gma06g02676 216 CDD SANT 69 112 IPR001005 -
Gma06g02676 216 Gene3D - 14 66 - -
Gma06g02676 216 CDD SANT 16 61 IPR001005 -
Gma06g02676 216 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 164 - -
Gma06g02676 216 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gma06g02676 216 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Gma06g02676 216 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma06g02676 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gma06g02676 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Gma06g02676 216 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 164 - -
Gma06g02676 216 Gene3D - 68 138 - -
Gma06g02676 216 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02676 Gma-Chr6 50356401 50388213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02676 1 196 MYB Transcription Factor Family AT2G31180 47.549 9.56e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma06g02676 Myb_DNA-binding 8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02676 K09422 - gmx:100777107 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02676 06 50356401 50388213 Gma06g02676 06 50356401 50388213 ECH