Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02670 ATGATTGTGGTTAAGTATAAGGGTGAGAAAAAACGCCTTTGTGCTGAGGAAGTATCATCTATGATCCTCGTTAAAATGCGGGAGGTTGCAGAGGCATATTTGAAATCCCATGTGAAGAATGCTGTTGTCACTGTTCCTGCCTATTTTAACTACTCTCAGCGAAAACCCACCAAAGATGCTGGTGCTATTGCTGGCCTTAATTTCATGCGAATAATCAATGAAACCATAGCTACTGCTATAGCATATGGCCTTGAAAAGAGAACTAATTGTGTCGAAAAGCGAAACATTTTCATATTTTATCTTGGTGGTGGAACTTTTGATGTGTCTCTCCTTACCATTAAGGACAAAGACTTCAAAGTTAAGGCCACTGCTGGAGACACTCATCTTGGAGGAGAAGACTTTGACAACAGAATGGTGAACTACATGGTACATGAATTCAAGAGGAAGAATAAAGTGGACATTAGTGGCAACCCAAAAGCCCGGAGGAGGGCTTTGACTTTTGCTTCCCAATTAATCACTCGTACAAAGTTTGAGGAAATCAATATGGAGCTCTTTCAAAAGTGTATGGAGATAGTAAATAGTTTTCTTACTTATGCTAATATGAACAAGAGAGATGTGCATGATGTTGTCCTTGTTGGTGGGTCTTCTAGGATTCCCAAAGTGCAACATTTATTGCAGAATTTCTTCGAGGGAAAGCATCTATGCAAGAGCATCAACCTTGATGAGGCAGATGCTTATGGTGAAGCTGTGCAGGCTATTTTGTTGGGGGAGTAA 774 0.4044 MIVVKYKGEKKRLCAEEVSSMILVKMREVAEAYLKSHVKNAVVTVPAYFNYSQRKPTKDAGAIAGLNFMRIINETIATAIAYGLEKRTNCVEKRNIFIFYLGGGTFDVSLLTIKDKDFKVKATAGDTHLGGEDFDNRMVNYMVHEFKRKNKVDISGNPKARRRALTFASQLITRTKFEEINMELFQKCMEIVNSFLTYANMNKRDVHDVVLVGGSSRIPKVQHLLQNFFEGKHLCKSINLDEADAYGEAVQAILLGE 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02670 257 Gene3D - 2 14 - -
Gma06g02670 257 Pfam Hsp70 protein 2 167 IPR013126 GO:0005524|GO:0140662
Gma06g02670 257 Pfam Hsp70 protein 170 255 IPR013126 GO:0005524|GO:0140662
Gma06g02670 257 Gene3D - 188 235 - -
Gma06g02670 257 PANTHER HEAT SHOCK 70 KDA PROTEIN 167 256 - -
Gma06g02670 257 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 165 - -
Gma06g02670 257 Gene3D Actin; Chain A, domain 4 130 168 - -
Gma06g02670 257 PANTHER HEAT SHOCK PROTEIN 70KDA 167 256 IPR013126 GO:0005524|GO:0140662
Gma06g02670 257 Gene3D Actin; Chain A, domain 4 171 187 - -
Gma06g02670 257 SUPERFAMILY Actin-like ATPase domain 93 253 IPR043129 -
Gma06g02670 257 Gene3D - 236 252 - -
Gma06g02670 257 PANTHER HEAT SHOCK PROTEIN 70KDA 1 165 IPR013126 GO:0005524|GO:0140662
Gma06g02670 257 PRINTS 70kDa heat shock protein signature 41 61 - -
Gma06g02670 257 PRINTS 70kDa heat shock protein signature 238 257 - -
Gma06g02670 257 PRINTS 70kDa heat shock protein signature 206 222 - -
Gma06g02670 257 Gene3D - 87 129 - -
Gma06g02670 257 Gene3D - 15 86 - -
Gma06g02670 257 SUPERFAMILY Actin-like ATPase domain 2 86 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02670 Gma-Chr6 50263621 50264476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02670 1 257 Calmodulin-binding Proteins AT5G02500 63.732 8.85e-120 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02670 K03283 - gmx:102667578 363.999