Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02664 ATGCGTTGGTCTTCCTTCTACCACACAGCCTCCAGGGTTTTCAATGAGTATCCATCATGGTCCAAGTCTGTTGTTGTATGCACTGTCATCAGTAGTGGAGGTCTAGTGGCATATTGCGATGCCAAACCAGAATATGCTAATCAAAGTCAAAAAAAGAAGGTGGTGGTGCTTGGAACTGGCTGGGCTGGAACCAGTTTTTTGAAAAACATGAAAAGCAACTCCTATGATATTCATGTGGTTTCACCACGTAACTACTTTGCATTCACTCCATTGCTACCAAGTGTCACGTGTGGCACAGTGGAAGCAAGGAGCGTCGTTGAACCGATTCGCAGTATCACACGAAAGAGCGGTGTAAATATTCATTTCAGTGAAGCTGAATGCTATAAGATCGATAACAAGAACAACAAAGTTTATTGCCGTGCTAGTAAAGACAAAAAGTTGGGTGGCCAAGAAGACTTTTCCATTGATTATGATTACCTGGTAATAGCCATGGGAGGCCGTTCTAATACCTTCAACACACCTGGTGTTCAAGAGCATGCCCATTTCTTGAAGGAAGTGGATGAAGCTCTAAAAATTCGTCATACAGTGGTTGACCTTTTTGAAAGAGCTAGCCTTCCTTCTTTACCAGTGGAAGAGAAGAAAAAACTTCTGAGTTTCGTAGTTGTTGGTGGTGGTCCAACTGGGGTAGAGTTTGCTGCTGAGCTTCATGACTTTGTGCTTGAGGATATGGCTAAGTTATATCCTTCCCTTAAAGACTATGTGAAGATTACTCTCCTGGAGGCAGGCGATCATATCTTAAACATGTTTGACAAGAGAATTACAGAATTTGCTGAACAAAAGTTTGCCAGAGATGGCATTGATGTGAGGTTGGGATCTATGGTTGTCAAAGTTGGTGAAAACGAAATCACTGCCAAAGAAAGGTCAAGTGGACAAATTGTTTCTATACCTCACGGAATGGTAGTTTGGTCAACTGGTATTGGTGCTCGCCCTGAAGTAGTTGAATTTATGAAGCAGCTTGGCCAGGTTAATAGACGTGCACTGGTCACTGATGAATGGCTAAGGGTGGAAGGATCTGACAACATCTATGCTCTAGGCGATTGTGCTACTATAAATCAACGTAGAGTTATGGAAGATATAGCCGTGATATTTAGCAAGGCTGACAAGAACAATTCTGGAAAATTAGATCTTCAAGAATTTAAAGAAGTTGTTGGCGACATTATTGACAGGTATCCACAAGTGGACATTTATTTAAAGAAGAACCAAATGAAAGACATGGCCAGCTTGCTAAAGAAATCTCAAGAAAGCAATATTATAGTGGACATTGAATACTTTAAAGAAGCCCTTTCCAAAGTAGACTCTCAGATGAAAAATCTTCCTGCAACAGCTCAGGTAGCTGCACAACAAGGAGTCTATCTTGCAAACTGTTTCAACCGCATGGAGGAGTGTGAGAAGTATCCAGAAGGCCCTCTCAGGTTCAGGGGAGTTGGACGCCATCGGTTCCGTCCCTTCAGGTACAAGCATTTGGGACAATTTGCTCCTCTAGGAGGAGAGCAAACTGCAGCTCAGCTTCCAGGAGATTGGATTTCAATTGGTCAGAGCACCCAGTGGCTATGGTATTCGGTGTATACAAGCAAACAAGTGAGCTGGAGGACAAGGTTTTTGGTGGTTGGTGACTGGGGAAGGCGATTCATATTTGGAAGGGACTCAAGTAAAATCTAA 1719 0.4276 MRWSSFYHTASRVFNEYPSWSKSVVVCTVISSGGLVAYCDAKPEYANQSQKKKVVVLGTGWAGTSFLKNMKSNSYDIHVVSPRNYFAFTPLLPSVTCGTVEARSVVEPIRSITRKSGVNIHFSEAECYKIDNKNNKVYCRASKDKKLGGQEDFSIDYDYLVIAMGGRSNTFNTPGVQEHAHFLKEVDEALKIRHTVVDLFERASLPSLPVEEKKKLLSFVVVGGGPTGVEFAAELHDFVLEDMAKLYPSLKDYVKITLLEAGDHILNMFDKRITEFAEQKFARDGIDVRLGSMVVKVGENEITAKERSSGQIVSIPHGMVVWSTGIGARPEVVEFMKQLGQVNRRALVTDEWLRVEGSDNIYALGDCATINQRRVMEDIAVIFSKADKNNSGKLDLQEFKEVVGDIIDRYPQVDIYLKKNQMKDMASLLKKSQESNIIVDIEYFKEALSKVDSQMKNLPATAQVAAQQGVYLANCFNRMEECEKYPEGPLRFRGVGRHRFRPFRYKHLGQFAPLGGEQTAAQLPGDWISIGQSTQWLWYSVYTSKQVSWRTRFLVVGDWGRRFIFGRDSSKI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02664 572 PANTHER NADH DEHYDROGENASE 70 572 IPR045024 GO:0003954|GO:0006116
Gma06g02664 572 SUPERFAMILY EF-hand 368 458 IPR011992 -
Gma06g02664 572 SUPERFAMILY FAD/NAD(P)-binding domain 210 371 IPR036188 -
Gma06g02664 572 Pfam Pyridine nucleotide-disulphide oxidoreductase 52 377 IPR023753 GO:0016491
Gma06g02664 572 Gene3D - 419 572 - -
Gma06g02664 572 Gene3D - 44 399 - -
Gma06g02664 572 PRINTS FAD-dependent pyridine nucleotide reductase signature 346 368 - -
Gma06g02664 572 PRINTS FAD-dependent pyridine nucleotide reductase signature 54 73 - -
Gma06g02664 572 PRINTS FAD-dependent pyridine nucleotide reductase signature 157 175 - -
Gma06g02664 572 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Gma06g02664 572 PANTHER NAD(P)H DEHYDROGENASE B2 70 572 - -
Gma06g02664 572 ProSitePatterns EF-hand calcium-binding domain. 387 399 IPR018247 -
Gma06g02664 572 SMART efh_1 378 406 IPR002048 GO:0005509
Gma06g02664 572 SUPERFAMILY FAD/NAD(P)-binding domain 51 270 IPR036188 -
Gma06g02664 572 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02664 Gma-Chr6 50176121 50181401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02664 1 572 Chloroplast and Mitochondria Gene Families AT4G21490 67.354 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02664 K03885 - gmx:100820044 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02664 06 50176121 50181401 Gma06g02664 06 50176121 50181401 ECH
Gma12g00954 12 9961131 9967961 Gma06g02664 06 50176121 50181401 GST