Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02663 atgtggtttttggcggttgatggaagttatttctttttaaaaattgtcgttgatggaagttttagtaacttccatagatcaattacactaaaatgtccaacaGTTCAAACAGGATGCCAGGTTGTCGTTGTTAATGACAAGGATATTACAGTGAAGGTGAAATCAACGGGAGATGTTTGCTTAGTGTCACATGGGTTGATTGTCTATttacaaaaatatatcttcaacaACGGTCTGGTCAACATTTCAACTCTACAAGTTATAAGGGACTTTATGGAAGAAATTGGGCAGACTAAAAGGCATGTACTAGCAACTAATGAATGGTTGCGTGTGAAGGGATGTGAAGATGTGTATGCCATTGGTGACTGTTCTAGCATAACTCAACGTAAAATCATGGATGATATCACATCCATATTTGAGGCTGCAGGCAAAAATAACTCCGGCACCTTAACTATTGAAGAATTCCAGGAGGTGATGGATGACATTATCTTAAGATATCCACAAGAAATAGACATCGAAGTGTTTAAGCTGGCCCTTTATCATGCAGATTCACAGGTGAAGAGTCTGCCAGCAACTGCACAGGTTGCTGCCCAACAGGGTGCATATCTAGCTAGATGTCTTAACTGCAGGGATCATGCTGAAGAGAATCCTGAAGGTCCTCACGATTTAGCGGATCTGGACGTCATAAGTTTCTTACCTTCAGTTGAAACCACGTTCGTATGTTGGACTTTAAGGTCTGTTACATATGAGGCCTATTGCTCAACTGTTCAAGCAAAATATAACAATTGTGATTTGTTAAAACGCCTGTATAGGCATTTGGGACAATTTGCTCCACTGTGTGGGGAGCAGGCAGCTGCAGAACTTCCTGGAGACTGGGTTTCCATGGGCCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGGCCACAAGGGTCTTGGTCATGTCTGATTGGACAAGAAGGTTCATATTTGGCAGGGATTCAAGTAGAGTTTAA 1014 0.3777 MWFLAVDGSYFFLKIVVDGSFSNFHRSITLKCPTVQTGCQVVVVNDKDITVKVKSTGDVCLVSHGLIVYLQKYIFNNGLVNISTLQVIRDFMEEIGQTKRHVLATNEWLRVKGCEDVYAIGDCSSITQRKIMDDITSIFEAAGKNNSGTLTIEEFQEVMDDIILRYPQEIDIEVFKLALYHADSQVKSLPATAQVAAQQGAYLARCLNCRDHAEENPEGPHDLADLDVISFLPSVETTFVCWTLRSVTYEAYCSTVQAKYNNCDLLKRLYRHLGQFAPLCGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWATRVLVMSDWTRRFIFGRDSSRV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02663 337 ProSiteProfiles EF-hand calcium-binding domain profile. 130 165 IPR002048 GO:0005509
Gma06g02663 337 Gene3D - 173 337 - -
Gma06g02663 337 PANTHER NADH DEHYDROGENASE 269 337 IPR045024 GO:0003954|GO:0006116
Gma06g02663 337 PANTHER NADH DEHYDROGENASE 169 233 IPR045024 GO:0003954|GO:0006116
Gma06g02663 337 PANTHER NADH DEHYDROGENASE 34 168 IPR045024 GO:0003954|GO:0006116
Gma06g02663 337 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 169 233 - -
Gma06g02663 337 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 34 168 - -
Gma06g02663 337 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 269 337 - -
Gma06g02663 337 Gene3D - 25 145 - -
Gma06g02663 337 SUPERFAMILY EF-hand 81 178 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02663 Gma-Chr6 50171582 50174993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02663 35 337 EF-hand Containing Proteins AT4G05020 49.415 1.10e-104 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02663 K03885 - gmx:100793566 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02663 06 50171582 50174993 Gma06g02663 06 50171582 50174993 ECH
Gma12g00955 12 9969150 9974886 Gma06g02663 06 50171582 50174993 GST