Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02648 ATGGGTTCTTGCATCTCAACAAGCAGTAGGAGTACTTGTAGCAGCAAGAGCAATGGAGATATGGTCTCTCCATCTTGCTTAGAAATTGGATGCTGTGGCCAAAAGAGAACAAGGAGAACATTCTCTGATCATGTTATTTCTCTCCACCATTTACCATCCTTACCTAGCAGAATTTTCTCCAATGGAAAGAGCCGCGGTTCGTGCATATTTACACAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCCGAAGATACTATCTTTTGTGGTGTCTTTGATGGCCATGGTCCACACGGTCATCTAGTCGCGCGCAAAGTGAGGGATGCATTGCCAATTAAGCTAATTTCATCTTTGCATTCTAATGAATCTAAGCGAAATGGGTCAGGTAAAACTTGCTTCAAAGGGAATGTAAAACCTGATAGTGGAGAATCTGAGAAGGATTGCTCTGCGGAGGATAAACTGAACTCAACATGGAGGGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTCAGGTCTCATCCGAATCTGGATTGCTTCTGTAGTGGGAGCACTGCTGTGACTATAGTGAAGCAGGGTTCAAATCTGTTCATGGGCTATATCGGGGATTCTCGAGCAATCATGGGATCCAAGGATAGCAATGACTCCATGGTGGCTATTCAGTTGACTGTTGATTTAAAGCCTGATTTGCCAAGGGAAGCAGAGAGAATTAAGAAGTGCAGAGGTAGGGTAtttgctttgcaagatgagcctgaagtgcctagggtgtggttgccttttgatgatgcgccgggattagccatggctagagcatttggtgatttctgcttgaaggagtatggtgtgatttctatacctgaattttctcaccggcagcttacagacagagatcagttcattgttcttgcctcagatgggGTGTGGGATGTTTTAAGCAACGAGGAGGTGGTTGAGATAGTATCTTCAGCGCCAACGCGATCATCAGCGGCAAGGATTCTGGTAGATTCTGCTGCTAGGGAGTGGAAACACAAATACCCTACATCAAAGATGGATGACTGTGCTGTAGTATGCTTATTTTTGGATGGGAAAATGGACTCGGAATCTGATTACGAGGAACAAGGCTTTTCTTCTGCAACCATCCAAAGCAACCATTCAGGTAACCCCATTGAGTCAGATGATGGACAAAAATCTGAGCCATCATTGCAAAGGAACTTCACTGTGAGATCCTCAGAGGAAAATGAGACAAATGGAGCACTATCTGTTGATGTTGTTGAAGATGCAACATCATCAGCTGATGATCAAAACTGGTCAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTTGTCCAACTTCCTAGATTTTCTGAGGAAAGGCCAAAATCTTGA 1416 0.3842 MGSCISTSSRSTCSSKSNGDMVSPSCLEIGCCGQKRTRRTFSDHVISLHHLPSLPSRIFSNGKSRGSCIFTQQGRKGINQDAMIVWEDFMSEDTIFCGVFDGHGPHGHLVARKVRDALPIKLISSLHSNESKRNGSGKTCFKGNVKPDSGESEKDCSAEDKLNSTWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKKCRGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRQLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKHKYPTSKMDDCAVVCLFLDGKMDSESDYEEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETNGALSVDVVEDATSSADDQNWSGLEGVTRVNSLVQLPRFSEERPKS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02648 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Gma06g02648 471 MobiDBLite consensus disorder prediction 128 156 - -
Gma06g02648 471 SUPERFAMILY PP2C-like 57 372 IPR036457 -
Gma06g02648 471 Pfam Protein phosphatase 2C 94 347 IPR001932 -
Gma06g02648 471 MobiDBLite consensus disorder prediction 381 427 - -
Gma06g02648 471 CDD PP2Cc 65 370 IPR001932 -
Gma06g02648 471 MobiDBLite consensus disorder prediction 1 21 - -
Gma06g02648 471 SMART PP2C_4 50 368 IPR001932 -
Gma06g02648 471 MobiDBLite consensus disorder prediction 380 430 - -
Gma06g02648 471 Gene3D - 58 378 IPR036457 -
Gma06g02648 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
Gma06g02648 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02648 Gma-Chr6 49973748 49979416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02648 1 471 PP2C-type Phosphatase Gene Family AT1G03590 69.811 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02648 - - gmx:100813306 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02648 06 49973748 49979416 Gma06g02648 06 49973748 49979416 ECH
Gma12g00975 12 10459938 10468563 Gma06g02648 06 49973748 49979416 GST
Gma13g02650 13 41243812 41246423 Gma06g02648 06 49973748 49979416 PCT
Gma12g01910 12 39731100 39734195 Gma06g02648 06 49973748 49979416 PCT
Gma06g02648 06 49973748 49979416 Gma13g02650 13 41243812 41246423 PCT
Gma06g02648 06 49973748 49979416 Gma12g01910 12 39731100 39734195 PCT