Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02642 ATGGCTAACAATAGGGAAAAGTCTACCAAGGAGGGTGTTGAAGAGACTCATCATCACAAGGTGATTGGTGAAAGTGAAGGCCAAGATTGGGAGATTGAGAAAGGAAAGGGTCTTGATTTGAGCTCAGGGAGGAGACAATGGAAGCCAGTTTTTGATGATGCTTCCCTGTCACACAGGCCTCTCAAGAAAATCCGAAGCCCCGAACGCGAAAACCCGAATCAACAACAACAACAACCACCATCCTCTATGCTGTCTCTTCAGCCTCCTTCATCAAGAATAGTGTTTCCTTTTGCTTTTGAAGGCTCTCAACATCCAATGCCATTCCCACACCCTTTTGGAACCACAAACTTGCCTCTTTTTCGTCCAAATCTTCATCCAACTCAACAAATGATATCTTTTGGGTCCCAACAGAACATGGGGTATCCACCATTCCTAGCCCCAGAATCTACCATGCCACACCAACACCAACAACACCTTCAACAACATCATCAACAGCTTCTTCATTATTGGAGTGATGCAATAAATTTGAGTCCAAGAGGGAGGATGATGATGATGATGAATAGGACTGAAGGAAGACAAATGTTAAGGCCACAAGCACAGCCTCTGAATGCTACCAAGCTCTATAGAGGAGTGAGGCAACGCCATTGGGGCAAATGGGTAGCCGAGATTCGTCTCCCTCGCAATCGAACTCGCCTTTGGCTTGGAACCTTTGACACTGCTGAAGATGCTGCTATGGCTTATGATCGCGAAGCCTTTAAGCTTAGAGGGGAAAATGCTAAGCTCAATTTCCCTGAACTCTTTCTCAACAAAGATAAAGCAGAACAATCCACAACTGTTGCTCCTGCTTCTTCTTCTAATGAAGGTTCAACATCAACATCAAGCCAGAACACAAAGCAACCAGAACCAATACCAGAAGAGATTAACACTGAGAGTGAGGACATACCACCAACAGAGACAATAGCAGAAGAGAATGCTGAAACTGGAAAAGGAATTTCACAACCTCAGGAATTGGTTTGGGGTGAATGGTTCAATGCAATTCCTGCAGGTTGGGGTCCTGGAAGTCCTGTGTGGGATGATTTGGACCCCAACAATAATCTTCTTTTGCATTCACAACTTCCCTTTGTGAATCCAAATCAGCAAGAGTTTCATGATGATGCTGGTGCTTCTTCTCAGATACAACAAGAAGATAACAGCACAGAACCAGCTCGAAGGACGGTTGTATATTATTATTCCGTTTGTAGTTTGTTATGCACATTGTCCGGTTTGGACTGA 1272 0.4434 MANNREKSTKEGVEETHHHKVIGESEGQDWEIEKGKGLDLSSGRRQWKPVFDDASLSHRPLKKIRSPERENPNQQQQQPPSSMLSLQPPSSRIVFPFAFEGSQHPMPFPHPFGTTNLPLFRPNLHPTQQMISFGSQQNMGYPPFLAPESTMPHQHQQHLQQHHQQLLHYWSDAINLSPRGRMMMMMNRTEGRQMLRPQAQPLNATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENAKLNFPELFLNKDKAEQSTTVAPASSSNEGSTSTSSQNTKQPEPIPEEINTESEDIPPTETIAEENAETGKGISQPQELVWGEWFNAIPAGWGPGSPVWDDLDPNNNLLLHSQLPFVNPNQQEFHDDAGASSQIQQEDNSTEPARRTVVYYYSVCSLLCTLSGLD 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02642 423 MobiDBLite consensus disorder prediction 274 315 - -
Gma06g02642 423 CDD AP2 206 266 IPR001471 GO:0003700|GO:0006355
Gma06g02642 423 MobiDBLite consensus disorder prediction 51 69 - -
Gma06g02642 423 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 1 395 - -
Gma06g02642 423 MobiDBLite consensus disorder prediction 70 87 - -
Gma06g02642 423 Gene3D AP2/ERF domain 207 265 IPR036955 GO:0003700|GO:0006355
Gma06g02642 423 Pfam AP2 domain 208 256 IPR001471 GO:0003700|GO:0006355
Gma06g02642 423 MobiDBLite consensus disorder prediction 1 87 - -
Gma06g02642 423 ProSiteProfiles AP2/ERF domain profile. 207 264 IPR001471 GO:0003700|GO:0006355
Gma06g02642 423 MobiDBLite consensus disorder prediction 274 304 - -
Gma06g02642 423 MobiDBLite consensus disorder prediction 1 41 - -
Gma06g02642 423 PRINTS Ethylene responsive element binding protein signature 208 219 IPR001471 GO:0003700|GO:0006355
Gma06g02642 423 PRINTS Ethylene responsive element binding protein signature 230 246 IPR001471 GO:0003700|GO:0006355
Gma06g02642 423 MobiDBLite consensus disorder prediction 379 400 - -
Gma06g02642 423 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 395 - -
Gma06g02642 423 SUPERFAMILY DNA-binding domain 207 265 IPR016177 GO:0003677
Gma06g02642 423 SMART rav1_2 207 270 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02642 Gma-Chr6 49874617 49876747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02642 32 361 AP2-EREBP Transcription Factor Family AT4G28140 41.493 1.68e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma06g02642 AP2 2.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02642 - - gmx:100811328 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02642 06 49874617 49876747 Gma06g02642 06 49874617 49876747 ECH