Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02621 ATGTCTACCTCTACCTTTCTCATTTCTCTGCTTGTTTTCATCACAAACCTTACCCTTCTTCTTCTTCTAACCTCAGTTTCATGCACAGAGTTCATCTACAACACCAACTTCAACTCCACCAACACCCTTCTACATGGCAACGCCACCATAGAATCTTCCATCCTCACCCTTACCAACAGTTCCACCTTCTCTGTGGGTCGTGCTTTCTACCCTTTTAAGATCCCCACAAAACCTTCCAACTCTTCAACCCCTTTACCATTCTCAGCCTCATTCATTTTCTCCATTGCACCATTCAAAGACCTTCTCCCTGGCCATGGCTTTGTCTTCATACTGACACCTTCTGCAGGCACCACTGGGGTGAACTCTGCTCAGCATCTTGGCCTCTTTAACTATACCAACAATGGTGATCCCAACAACCATGTCTTTGGGGTTGAGTTTGATGTGTTTGATAACCAAGAATTCAATGATATCAATGACAACCATGTGGGGGTGGACATAAACTCTCTTTCTTCTTTTGCTTCCCATGATGCTGGATTTTGGGGTGGCAGTGACAACGACGAGTTCGAGGATTTGAAGCTTAATGATGGCGAGAACTATCAGGTGTGGATTGAATATTTGGATTCTAGAGTCAATGTCACAATGGCTCCTGCAGGCCAAAAAAGGCCTCAGAGGCCCTTGATTAGTGAAATTGTGGATCTTTCTGAAGTTCTTTTGGATGAAATGTTTGTTGGATTTTGTGGGGCAACAGGGCAGCTTGTGGAGAGTCACAAGATTTTGGCTTGGAGCTTTAGTAACTCAAATTTTTCCATTGGTGATGCTTTGGTCACTACAAATTTGCCTTCATTTGTTCTTTCCAAAGAGTCTATTTTGAGGTCAACAGGTTTTATTGTAGGGATCATTGTAGGTGTTTTGTTTGTCCTTAGTGCTGCTGTTGTGATATTTGTGTTTTTTCTCAGAAGAAAAAGGAGTAAAAGAAAGGATGAAGAAATTGAAGATTGGGAACTAGAGTATTGGCCTCACCGTGTTAGTTATGAAGATATTTATTCTGCTACTAAAGGATTTTCAGACCAACATGTAATTGGATTTGGAGGGAATGGTAAAGTCTACAAAGGGCTTCTGCAAGGAGTGCAAGTTGCAGTGAAAAGAATTCCATGTGACAGTGAACATGGAATGAGAGAGTTTTTGTCTGAGATTTCAAGTTTAGGCAGGTTGAAGCATAGGAATGTGGTTCCAATGAGAGGTTGGTGTAAGAAAGATAGGAGCCTGATTTTAATATATGACTATATGGATAATGGTAGTTTAGATAAAAGAATATTTGATGATGATGAGAACACAATTTTTGGGTGGGAGAAGAGAATCAAGGTGCTGAAGGATGTAGCACATGGAGTATTGTATTTGCATGAGGGTTGGGAGGTTAAGGTGTTGCACAGAGACATCAAGTCAAGCAATGTGTTACTTGATAAGGGTATGAATGCAAGATTGGGGGATTTTGGACTAGCAAGAATGCACAATCATGAGCAAATTGCTCATACCTCACAAGTGATTGGAACTGTTGGATTCATGGCACCAGAACTTATTCACACCGGGAGAGCCTCAACACAGACGGACGTTTTCAGCTTTGGAGTGTTGATTTTAGAGGTGGTGTGTGGGAGAAGACCAAATGAAGAAAACAAGCCTTTGGTTGCTTGGTTATGGAGGCTAAAGCAGAGAGGAGAAGAGTGTTCTGCTCTTGATGAAAGATTAAAAAAGAGGGGTGAATGTAACATTGATGAGGTTAAGAGGGTTCTTCATCTTGGTTTGTTGTGCACTCATCATGACCCTCATGTTAGGCCAAGTATGAGAGAGGTTGTGAAGGTGCTTGAGGGAGAGAATTTAGATATGAGCTTGCTTGACAAAATAAATTCAGCAGCTGGATATGTTGGGAGCTTTGTTAACAGATTTCACCCCACAATTGAGGATATTTACTCCTCCAACTGCTCTTTCTCAACTGTGTGTGACAAGGAAGGAAGATGA 2013 0.4158 MSTSTFLISLLVFITNLTLLLLLTSVSCTEFIYNTNFNSTNTLLHGNATIESSILTLTNSSTFSVGRAFYPFKIPTKPSNSSTPLPFSASFIFSIAPFKDLLPGHGFVFILTPSAGTTGVNSAQHLGLFNYTNNGDPNNHVFGVEFDVFDNQEFNDINDNHVGVDINSLSSFASHDAGFWGGSDNDEFEDLKLNDGENYQVWIEYLDSRVNVTMAPAGQKRPQRPLISEIVDLSEVLLDEMFVGFCGATGQLVESHKILAWSFSNSNFSIGDALVTTNLPSFVLSKESILRSTGFIVGIIVGVLFVLSAAVVIFVFFLRRKRSKRKDEEIEDWELEYWPHRVSYEDIYSATKGFSDQHVIGFGGNGKVYKGLLQGVQVAVKRIPCDSEHGMREFLSEISSLGRLKHRNVVPMRGWCKKDRSLILIYDYMDNGSLDKRIFDDDENTIFGWEKRIKVLKDVAHGVLYLHEGWEVKVLHRDIKSSNVLLDKGMNARLGDFGLARMHNHEQIAHTSQVIGTVGFMAPELIHTGRASTQTDVFSFGVLILEVVCGRRPNEENKPLVAWLWRLKQRGEECSALDERLKKRGECNIDEVKRVLHLGLLCTHHDPHVRPSMREVVKVLEGENLDMSLLDKINSAAGYVGSFVNRFHPTIEDIYSSNCSFSTVCDKEGR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02621 670 PANTHER - 19 627 - -
Gma06g02621 670 CDD lectin_legume_LecRK_Arcelin_ConA 29 266 IPR001220 GO:0030246
Gma06g02621 670 CDD STKc_IRAK 360 622 - -
Gma06g02621 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Gma06g02621 670 Gene3D - 27 276 - -
Gma06g02621 670 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 19 627 - -
Gma06g02621 670 CDD TM_EGFR-like 292 326 - -
Gma06g02621 670 Gene3D Transferase(Phosphotransferase) domain 1 429 634 - -
Gma06g02621 670 Pfam Protein kinase domain 355 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02621 670 ProSitePatterns Protein kinases ATP-binding region signature. 360 381 IPR017441 GO:0005524
Gma06g02621 670 SMART serkin_6 354 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02621 670 ProSiteProfiles Protein kinase domain profile. 354 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma06g02621 670 SUPERFAMILY Protein kinase-like (PK-like) 330 621 IPR011009 -
Gma06g02621 670 Pfam Legume lectin domain 29 267 IPR001220 GO:0030246
Gma06g02621 670 Gene3D Phosphorylase Kinase; domain 1 316 428 - -
Gma06g02621 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 266 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02621 Gma-Chr6 49552568 49554580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02621 26 571 Receptor kinase-like Gene Family AT4G04960 60.830 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma06g02621 Pkinase 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02621 - - gmx:100807059 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02621 06 49552568 49554580 Gma06g02621 06 49552568 49554580 ECH
Gma12g01017 12 11415253 11417490 Gma06g02621 06 49552568 49554580 GST