Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02594 ATGGGTGTGGATTACTACAAGATCTTGCAGGTTGATAGGAGCGCCAAAGACGATGACTTGAAGAAGGCTTATAGGAAACTTGCTATGAAATGGCACCCTGATAAGAACCCCAACAACAAGAAAGAAGCTGAAGCTAAGTTTAAGCAAATTTCCGAAGCATATGAGGTACTTAGTGATCCTCAAAAGAAAGCTATCTATGATCAATATGGGGAAGAGGGTCTGAAGGGTCAAGTTCCTCCTCCTGATGCTGGTGGTGCTGGAACTGGAACTACTTTCTTCTCCACAGGAGATATGCCGGGATCGTTTCGGTTCAATCCGAGGAATGCTGATGATATTTTTGCTGAGTTCTTTGGGTTCTCAAGCCCATTTGGTGGAATGGGTGGGAGAGGTGGTGGTGGTGGCGGTGGCGGCGGTGGCATGAGATCAAGGTTCCCTGGTGGGATGTTTGGTGATGATATGTTTGCATCTTTTGGGGAAGGAGGAGGAATACATATGAGTCAAGGTGCACCTCGGAAAGCTGCTCCCATTGAGAACAAATTGCCCTGCACTCTTGAGGAGATATATAAAGGGACTACAAAGAAGATGAAGATCTCTAGAGAAATTGCAGATGCCAGTGGAAAAACCATGCCAGTAGAGGAAATCTTGACCATTAATGTCAAGCCTGGCTGGAAGAAAGGAACAAAGATCACATTCCCCGAGAAGGGAAATGAACAGCCAAACGTGACACCTGCAGACCTTGTTTTCATTATAGATGAGAAACCGCACAGTGTCTTCGCCCGCGATGGAAACGACCTTGTTGTAACCCAGAAGATTTCTCTTGCAGAGGCATTAACTGGTTACACAGTGCACCTCACTACCCTAGATGGTAGAAACCTAACCATACCAATCAACAATGTTATTCATCCCAATTATGAAGAGGTTGTTCCAAGAGAAGGAATGCCACTTCCAAAAGATCCATCAAAGAAGGGGAACTTGAGGATAAAGTTTAACATCAAGTTCCCAACTAGGCTCACTGATGAGCAAAAAGCAGGAATCAGGAAACTCTTCAACAATGCCTAA 1059 0.4495 MGVDYYKILQVDRSAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYEVLSDPQKKAIYDQYGEEGLKGQVPPPDAGGAGTGTTFFSTGDMPGSFRFNPRNADDIFAEFFGFSSPFGGMGGRGGGGGGGGGGMRSRFPGGMFGDDMFASFGEGGGIHMSQGAPRKAAPIENKLPCTLEEIYKGTTKKMKISREIADASGKTMPVEEILTINVKPGWKKGTKITFPEKGNEQPNVTPADLVFIIDEKPHSVFARDGNDLVVTQKISLAEALTGYTVHLTTLDGRNLTIPINNVIHPNYEEVVPREGMPLPKDPSKKGNLRIKFNIKFPTRLTDEQKAGIRKLFNNA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02594 352 CDD DnaJ_C 174 337 - -
Gma06g02594 352 Pfam DnaJ C terminal domain 176 334 IPR002939 -
Gma06g02594 352 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 349 - -
Gma06g02594 352 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 349 - -
Gma06g02594 352 SUPERFAMILY HSP40/DnaJ peptide-binding domain 257 343 IPR008971 GO:0006457|GO:0051082
Gma06g02594 352 CDD DnaJ 4 59 IPR001623 -
Gma06g02594 352 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Gma06g02594 352 SUPERFAMILY HSP40/DnaJ peptide-binding domain 170 265 IPR008971 GO:0006457|GO:0051082
Gma06g02594 352 SMART dnaj_3 3 62 IPR001623 -
Gma06g02594 352 Gene3D DnaJ domain 3 127 IPR036869 -
Gma06g02594 352 Pfam DnaJ domain 4 67 IPR001623 -
Gma06g02594 352 SUPERFAMILY Chaperone J-domain 3 130 IPR036869 -
Gma06g02594 352 Coils Coil 346 352 - -
Gma06g02594 352 Gene3D - 255 335 - -
Gma06g02594 352 Gene3D - 175 253 - -
Gma06g02594 352 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gma06g02594 352 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gma06g02594 352 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gma06g02594 352 PRINTS DnaJ domain signature 62 81 IPR001623 -
Gma06g02594 352 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02594 Gma-Chr6 49218385 49221487 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02594 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 9.57e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02594 K09510 - gmx:100797487 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g02594 06 49218385 49221487 Gma06g02594 06 49218385 49221487 ECH