Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g02586 ATGGCTTCCAAACCTCGCAGTGTAGAAGAGATCTTCAAGGACTATAGCGCCCGAAGAATCGCTATTATTCGTGCACTCACTCATGAGGAAGTTCCTCCAGAGCTCCCTGAGCCAACTCTTGGAATCAATTTTGCTAGGGATGATGTGAGTCGCAGGGATTGGATTTCTTTGGTTGCTATGCATAGTGATTCGTGGTTGCTTTCTGTGGCCGATCCAACTCTTCGGTTTTTTACAACATTCATTTTACATTGGTCGATCAATAATCGACTTAAAAAGAACACAGTGGAAATCTCAAGTGAACATAGTGAAGCAACTCTTAGACTTCTCGTGATGGCAAAGCCGATCCAACTGGCGGACCAAGTGGCCAAGGCAGCGAAAGAGGCATGTGGCCAAGACAGAGAAGTTGGCCTGGCTGCTCCGGCAAGCGGCCCGCGCGAGCTCCGACCCCTACGAGCGGCCCACGCAACGCATCATCGCCGACACTGA 486 0.5021 MASKPRSVEEIFKDYSARRIAIIRALTHEEVPPELPEPTLGINFARDDVSRRDWISLVAMHSDSWLLSVADPTLRFFTTFILHWSINNRLKKNTVEISSEHSEATLRLLVMAKPIQLADQVAKAAKEACGQDREVGLAAPASGPRELRPLRAAHATHHRRH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g02586 161 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 1 2 29 - -
Gma06g02586 161 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 1 29 70 - -
Gma06g02586 161 PANTHER CPG BINDING PROTEIN 29 70 IPR045104 GO:0006355|GO:0042393
Gma06g02586 161 PANTHER CPG BINDING PROTEIN 2 29 IPR045104 GO:0006355|GO:0042393
Gma06g02586 161 Pfam Alfin 28 70 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g02586 Gma-Chr6 49155547 49157244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g02586 5 83 Alfin-like Transcription Factor Family AT3G42790 39.640 1.02e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g02586 - - gmx:100784077 118.242